The gut-microbiota-brain axis in a Spanish population in the aftermath of the COVID-19 pandemic: microbiota composition linked to anxiety, trauma, and depression profiles

by Stefanie Malan-Müller, Mireia Valles-Colomer, Tomás Palomo, Juan C. Leza
Published 2023-12-01

Butyrate Producers as Potential Next-Generation Probiotics: Safety Assessment of the Administration of <italic toggle="yes">Butyricicoccus pullicaecorum</italic> to Healthy Volunte...

by Leen Boesmans, Mireia Valles-Colomer, Jun Wang, Venessa Eeckhaut, Gwen Falony, Richard Ducatelle, Filip Van Immerseel, Jeroen Raes, Kristin Verbeke
Published 2018-10-01

Gut microbiome variation is associated to Multiple Sclerosis phenotypic subtypes

by Tatjana Reynders, Lindsay Devolder, Mireia Valles‐Colomer, Ann Van Remoortel, Marie Joossens, Jacques De Keyser, Guy Nagels, Marie D’hooghe, Jeroen Raes
Published 2020-04-01

Neuroblastoma is associated with alterations in gut microbiome composition subsequent to maternal microbial seedingResearch in context

by Mireia Valles-Colomer, Paolo Manghi, Fabio Cumbo, Giulia Masetti, Federica Armanini, Francesco Asnicar, Aitor Blanco-Miguez, Federica Pinto, Michal Punčochář, Alberto Garaventa, Loredana Amoroso, Mirco Ponzoni, Maria Valeria Corrias, Nicola Segata
Published 2024-01-01

Successional Stages in Infant Gut Microbiota Maturation

by Leen Beller, Ward Deboutte, Gwen Falony, Sara Vieira-Silva, Raul Yhossef Tito, Mireia Valles-Colomer, Leen Rymenans, Daan Jansen, Lore Van Espen, Maria Ioanna Papadaki, Chenyan Shi, Claude Kwe Yinda, Mark Zeller, Karoline Faust, Marc Van Ranst, Jeroen Raes, Jelle Matthijnssens
Published 2021-12-01

Successional Stages in Infant Gut Microbiota Maturation

by Leen Beller, Ward Deboutte, Gwen Falony, Sara Vieira-Silva, Raul Yhossef Tito, Mireia Valles-Colomer, Leen Rymenans, Daan Jansen, Lore Van Espen, Maria Ioanna Papadaki, Chenyan Shi, Claude Kwe Yinda, Mark Zeller, Karoline Faust, Marc Van Ranst, Jeroen Raes, Jelle Matthijnssens
Published 2021-12-01

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

by Francesco Beghini, Lauren J McIver, Aitor Blanco-Míguez, Leonard Dubois, Francesco Asnicar, Sagun Maharjan, Ana Mailyan, Paolo Manghi, Matthias Scholz, Andrew Maltez Thomas, Mireia Valles-Colomer, George Weingart, Yancong Zhang, Moreno Zolfo, Curtis Huttenhower, Eric A Franzosa, Nicola Segata
Published 2021-05-01

Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly

by Nicolai Karcher, Eleonora Nigro, Michal Punčochář, Aitor Blanco-Míguez, Matteo Ciciani, Paolo Manghi, Moreno Zolfo, Fabio Cumbo, Serena Manara, Davide Golzato, Anna Cereseto, Manimozhiyan Arumugam, Thi Phuong Nam Bui, Hanne L. P. Tytgat, Mireia Valles-Colomer, Willem M. de Vos, Nicola Segata
Published 2021-07-01

Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations

by Nicolai Karcher, Edoardo Pasolli, Francesco Asnicar, Kun D. Huang, Adrian Tett, Serena Manara, Federica Armanini, Debbie Bain, Sylvia H. Duncan, Petra Louis, Moreno Zolfo, Paolo Manghi, Mireia Valles-Colomer, Roberta Raffaetà, Omar Rota-Stabelli, Maria Carmen Collado, Georg Zeller, Daniel Falush, Frank Maixner, Alan W. Walker, Curtis Huttenhower, Nicola Segata
Published 2020-06-01

MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice

by Paolo Manghi, Aitor Blanco-Míguez, Serena Manara, Amir NabiNejad, Fabio Cumbo, Francesco Beghini, Federica Armanini, Davide Golzato, Kun D. Huang, Andrew M. Thomas, Gianmarco Piccinno, Michal Punčochář, Moreno Zolfo, Till R. Lesker, Marius Bredon, Julien Planchais, Jeremy Glodt, Mireia Valles-Colomer, Omry Koren, Edoardo Pasolli, Francesco Asnicar, Till Strowig, Harry Sokol, Nicola Segata
Published 2023-05-01

A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults

by Lea B. S. Hansen, Henrik M. Roager, Nadja B. Søndertoft, Rikke J. Gøbel, Mette Kristensen, Mireia Vallès-Colomer, Sara Vieira-Silva, Sabine Ibrügger, Mads V. Lind, Rasmus B. Mærkedahl, Martin I. Bahl, Mia L. Madsen, Jesper Havelund, Gwen Falony, Inge Tetens, Trine Nielsen, Kristine H. Allin, Henrik L. Frandsen, Bolette Hartmann, Jens Juul Holst, Morten H. Sparholt, Jesper Holck, Andreas Blennow, Janne Marie Moll, Anne S. Meyer, Camilla Hoppe, Jørgen H. Poulsen, Vera Carvalho, Domenico Sagnelli, Marlene D. Dalgaard, Anders F. Christensen, Magnus Christian Lydolph, Alastair B. Ross, Silas Villas-Bôas, Susanne Brix, Thomas Sicheritz-Pontén, Karsten Buschard, Allan Linneberg, Jüri J. Rumessen, Claus T. Ekstrøm, Christian Ritz, Karsten Kristiansen, H. Bjørn Nielsen, Henrik Vestergaard, Nils J. Færgeman, Jeroen Raes, Hanne Frøkiær, Torben Hansen, Lotte Lauritzen, Ramneek Gupta, Tine Rask Licht, Oluf Pedersen
Published 2018-11-01