A case study for large-scale human microbiome analysis using JCVI's metagenomics reports (METAREP).

by Johannes Goll, Mathangi Thiagarajan, Sahar Abubucker, Curtis Huttenhower, Shibu Yooseph, Barbara A Methé
Published 2012-01-01

The binary protein interactome of Treponema pallidum--the syphilis spirochete.

by Björn Titz, Seesandra V Rajagopala, Johannes Goll, Roman Häuser, Matthew T McKevitt, Timothy Palzkill, Peter Uetz
Published 2008-05-01

Metabolic reconstruction for metagenomic data and its application to the human microbiome.

by Sahar Abubucker, Nicola Segata, Johannes Goll, Alyxandria M Schubert, Jacques Izard, Brandi L Cantarel, Beltran Rodriguez-Mueller, Jeremy Zucker, Mathangi Thiagarajan, Bernard Henrissat, Owen White, Scott T Kelley, Barbara Methé, Patrick D Schloss, Dirk Gevers, Makedonka Mitreva, Curtis Huttenhower
Published 2012-01-01

Functional tradeoffs underpin salinity-driven divergence in microbial community composition.

by Chris L Dupont, John Larsson, Shibu Yooseph, Karolina Ininbergs, Johannes Goll, Johannes Asplund-Samuelsson, John P McCrow, Narin Celepli, Lisa Zeigler Allen, Martin Ekman, Andrew J Lucas, Åke Hagström, Mathangi Thiagarajan, Björn Brindefalk, Alexander R Richter, Anders F Andersson, Aaron Tenney, Daniel Lundin, Andrey Tovchigrechko, Johan A A Nylander, Daniel Brami, Jonathan H Badger, Andrew E Allen, Douglas B Rusch, Jeff Hoffman, Erling Norrby, Robert Friedman, Jarone Pinhassi, J Craig Venter, Birgitta Bergman
Published 2014-01-01

Microbial Community Function and Biomarker Discovery in the Human Microbiome

by Abubucker, Sahar, Goll, Johannes, Schubert, Alyxandria M, Cantarel, Brandi L, Rodriguez-Mueller, Beltran, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T, Methé, Barbara, Schloss, Patrick D, Gevers, Dirk, Mitreva, Makedonka, Izard, Jacques Georges, Waldron, Levi D., Zucker, Jeremy Daniel Hofeld, Garrett, Wendy S., Huttenhower, Curtis, Segata, Nicola
Published 2013

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

by Abubucker, Sahar, Goll, Johannes, Schubert, Alyxandria M., Cantarel, Brandi L., Rodriguez-Mueller, Beltran, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T., Methé, Barbara, Schloss, Patrick D., Gevers, Dirk, Mitreva, Makedonka, Segata, Nicola, Izard, Jacques Georges, Zucker, Jeremy Daniel Hofeld, Huttenhower, Curtis
Published 2013