Single-Nucleotide Polymorphisms Sequencing Identifies Candidate Functional Variants at Prostate Cancer Risk Loci

by Peng Zhang, Lori S. Tillmans, Stephen N. Thibodeau, Liang Wang
Published 2019-07-01

How well do whole exome sequencing results correlate with medical findings? A study of 89 Mayo Clinic Biobank samples

by Sumit eMiddha, Noralane M Lindor, Noralane M Lindor, Shannon K McDonnell, Janet E Olson, Janet E Olson, Kiley J Johnson, Kiley J Johnson, Eric D Wieben, Eric D Wieben, Gianrico eFarrugia, Gianrico eFarrugia, James R Cerhan, James R Cerhan, Stephen N Thibodeau, Stephen N Thibodeau
Published 2015-07-01

Leukocyte DNA methylation signature differentiates pancreatic cancer patients from healthy controls.

by Katrina S Pedersen, William R Bamlet, Ann L Oberg, Mariza de Andrade, Martha E Matsumoto, Hui Tang, Stephen N Thibodeau, Gloria M Petersen, Liang Wang
Published 2011-03-01

Characteristics Associated With Recruitment and Re-contact in Mayo Clinic Biobank

by Matthew A. Hathcock, Christine Kirt, Euijung Ryu, Josh Bublitz, Ruchi Gupta, Liwei Wang, Stephen N. Thibodeau, Nicole L. Larson, Mine S. Cicek, James R. Cerhan, Janet E. Olson
Published 2020-02-01

A microRNA Transcriptome-wide Association Study of Prostate Cancer Risk

by Nicholas B. Larson, Shannon K. McDonnell, Zachary Fogarty, Yuanhang Liu, Amy J. French, Lori S. Tillmans, John C. Cheville, Liang Wang, Daniel J. Schaid, Stephen N. Thibodeau
Published 2022-03-01

Mutations in the human naked cuticle homolog NKD1 found in colorectal cancer alter Wnt/Dvl/beta-catenin signaling.

by Jianhui Guo, Tolga Cagatay, Guangjin Zhou, Chih-Chiang Chan, Shelby Blythe, Kaye Suyama, Li Zheng, Kaifeng Pan, Chiping Qian, Richard Hamelin, Stephen N Thibodeau, Peter S Klein, Keith A Wharton, Wanguo Liu
Published 2009-11-01

Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines.

by Liang Wang, Ann L Oberg, Yan W Asmann, Hugues Sicotte, Shannon K McDonnell, Shaun M Riska, Wanguo Liu, Clifford J Steer, Subbaya Subramanian, Julie M Cunningham, James R Cerhan, Stephen N Thibodeau
Published 2009-06-01

miRNA expression in colon polyps provides evidence for a multihit model of colon cancer.

by Ann L Oberg, Amy J French, Aaron L Sarver, Subbaya Subramanian, Bruce W Morlan, Shaun M Riska, Pedro M Borralho, Julie M Cunningham, Lisa A Boardman, Liang Wang, Thomas C Smyrk, Yan Asmann, Clifford J Steer, Stephen N Thibodeau
Published 2011-01-01

cis-Expression QTL analysis of established colorectal cancer risk variants in colon tumors and adjacent normal tissue.

by Lenora W M Loo, Iona Cheng, Maarit Tiirikainen, Annette Lum-Jones, Ann Seifried, Lucas M Dunklee, James M Church, Robert Gryfe, Daniel J Weisenberger, Robert W Haile, Steven Gallinger, David J Duggan, Stephen N Thibodeau, Graham Casey, Loïc Le Marchand
Published 2012-01-01

High-throughput screening of prostate cancer risk loci by single nucleotide polymorphisms sequencing

by Peng Zhang, Ji-Han Xia, Jing Zhu, Ping Gao, Yi-Jun Tian, Meijun Du, Yong-Chen Guo, Sufyan Suleman, Qin Zhang, Manish Kohli, Lori S. Tillmans, Stephen N. Thibodeau, Amy J. French, James R. Cerhan, Li-Dong Wang, Gong-Hong Wei, Liang Wang
Published 2018-05-01

An expanded variant list and assembly annotation identifies multiple novel coding and noncoding genes for prostate cancer risk using a normal prostate tissue eQTL data set.

by Melissa S DeRycke, Melissa C Larson, Asha A Nair, Shannon K McDonnell, Amy J French, Lori S Tillmans, Shaun M Riska, Saurabh Baheti, Zachary C Fogarty, Nicholas B Larson, Daniel R O'Brien, John C Cheville, Liang Wang, Daniel J Schaid, Stephen N Thibodeau
Published 2019-01-01

Correlation of chromosomal instability, telomere length and telomere maintenance in microsatellite stable rectal cancer: a molecular subclass of rectal cancer.

by Lisa A Boardman, Ruth A Johnson, Kimberly B Viker, Kari A Hafner, Robert B Jenkins, Douglas L Riegert-Johnson, Thomas C Smyrk, Kristin Litzelman, Songwon Seo, Ronald E Gangnon, Corinne D Engelman, David N Rider, Russell J Vanderboom, Stephen N Thibodeau, Gloria M Petersen, Halcyon G Skinner
Published 2013-01-01

Distinct microbes, metabolites, and ecologies define the microbiome in deficient and proficient mismatch repair colorectal cancers

by Vanessa L. Hale, Patricio Jeraldo, Jun Chen, Michael Mundy, Janet Yao, Sambhawa Priya, Gary Keeney, Kelly Lyke, Jason Ridlon, Bryan A. White, Amy J. French, Stephen N. Thibodeau, Christian Diener, Osbaldo Resendis-Antonio, Jaime Gransee, Tumpa Dutta, Xuan-Mai Petterson, Jaeyun Sung, Ran Blekhman, Lisa Boardman, David Larson, Heidi Nelson, Nicholas Chia
Published 2018-10-01

Interaction between polymorphisms in aspirin metabolic pathways, regular aspirin use and colorectal cancer risk: A case-control study in unselected white European populations.

by Harsh Sheth, Emma Northwood, Cornelia M Ulrich, Dominique Scherer, Faye Elliott, Jennifer H Barrett, David Forman, C Roland Wolf, Gillian Smith, Michael S Jackson, Mauro Santibanez-Koref, Robert Haile, Graham Casey, Mark Jenkins, Aung Ko Win, John L Hopper, Loic Le Marchand, Noralane M Lindor, Stephen N Thibodeau, John D Potter, John Burn, D Timothy Bishop
Published 2018-01-01

Specific variants in the MLH1 gene region may drive DNA methylation, loss of protein expression, and MSI-H colorectal cancer.

by Miralem Mrkonjic, Nicole M Roslin, Celia M Greenwood, Stavroula Raptis, Aaron Pollett, Peter W Laird, Vaijayanti V Pethe, Theodore Chiang, Darshana Daftary, Elizabeth Dicks, Stephen N Thibodeau, Steven Gallinger, Patrick S Parfrey, H Banfield Younghusband, John D Potter, Thomas J Hudson, John R McLaughlin, Roger C Green, Brent W Zanke, Polly A Newcomb, Andrew D Paterson, Bharati Bapat
Published 2010-10-01

Association between germline variants and somatic mutations in colorectal cancer

by Richard Barfield, Conghui Qu, Robert S. Steinfelder, Chenjie Zeng, Tabitha A. Harrison, Stefanie Brezina, Daniel D. Buchanan, Peter T. Campbell, Graham Casey, Steven Gallinger, Marios Giannakis, Stephen B. Gruber, Andrea Gsur, Li Hsu, Jeroen R. Huyghe, Victor Moreno, Polly A. Newcomb, Shuji Ogino, Amanda I. Phipps, Martha L. Slattery, Stephen N. Thibodeau, Quang M. Trinh, Amanda E. Toland, Thomas J. Hudson, Wei Sun, Syed H. Zaidi, Ulrike Peters
Published 2022-06-01

Correction: Colorectal Cancer Linkage on Chromosomes 4q21, 8q13, 12q24, and 15q22.

by Mine S. Cicek, Julie M. Cunningham, Brooke L. Fridley, Daniel J. Serie, William R. Bamlet, Brenda Diergaarde, Robert W. Haile, Loic Le Marchand, Theodore G. Krontiris, H. Banfield Younghusband, Steven Gallinger, Polly A. Newcomb, John L. Hopper, Mark A. Jenkins, Graham Casey, Fredrick Schumacher, Zhu Chen, Melissa S. DeRycke, Allyson S. Templeton, Ingrid Winship, Roger C. Green, Jane S. Green, Finlay A. Macrae, Susan Parry, Graeme P. Young, Joanne P. Young, Daniel Buchanan, Duncan C. Thomas, D. Timothy Bishop, Noralane M. Lindor, Stephen N. Thibodeau, John D. Potter, Ellen L. Goode
Published 2012-01-01

Colorectal cancer linkage on chromosomes 4q21, 8q13, 12q24, and 15q22.

by Mine S Cicek, Julie M Cunningham, Brooke L Fridley, Daniel J Serie, William R Bamlet, Brenda Diergaarde, Robert W Haile, Loic Le Marchand, Theodore G Krontiris, H Banfield Younghusband, Steven Gallinger, Polly A Newcomb, John L Hopper, Mark A Jenkins, Graham Casey, Fredrick Schumacher, Zhu Chen, Melissa S DeRycke, Allyson S Templeton, Ingrid Winship, Roger C Green, Jane S Green, Finlay A Macrae, Susan Parry, Graeme P Young, Joanne P Young, Daniel Buchanan, Duncan C Thomas, D Timothy Bishop, Noralane M Lindor, Stephen N Thibodeau, John D Potter, Ellen L Goode, Colon CFR
Published 2012-01-01

Genome-Wide Interaction Analyses between Genetic Variants and Alcohol Consumption and Smoking for Risk of Colorectal Cancer.

by Jian Gong, Carolyn M Hutter, Polly A Newcomb, Cornelia M Ulrich, Stephanie A Bien, Peter T Campbell, John A Baron, Sonja I Berndt, Stephane Bezieau, Hermann Brenner, Graham Casey, Andrew T Chan, Jenny Chang-Claude, Mengmeng Du, David Duggan, Jane C Figueiredo, Steven Gallinger, Edward L Giovannucci, Robert W Haile, Tabitha A Harrison, Richard B Hayes, Michael Hoffmeister, John L Hopper, Thomas J Hudson, Jihyoun Jeon, Mark A Jenkins, Jonathan Kocarnik, Sébastien Küry, Loic Le Marchand, Yi Lin, Noralane M Lindor, Reiko Nishihara, Shuji Ogino, John D Potter, Anja Rudolph, Robert E Schoen, Petra Schrotz-King, Daniela Seminara, Martha L Slattery, Stephen N Thibodeau, Mark Thornquist, Reka Toth, Robert Wallace, Emily White, Shuo Jiao, Mathieu Lemire, Li Hsu, Ulrike Peters, CCFR and GECCO
Published 2016-10-01

KLK3 SNP–SNP interactions for prediction of prostate cancer aggressiveness

by Hui-Yi Lin, Po-Yu Huang, Chia-Ho Cheng, Heng-Yuan Tung, Zhide Fang, Anders E. Berglund, Ann Chen, Jennifer French-Kwawu, Darian Harris, Julio Pow-Sang, Kosj Yamoah, John L. Cleveland, Shivanshu Awasthi, Robert J. Rounbehler, Travis Gerke, Jasreman Dhillon, Rosalind Eeles, Zsofia Kote-Jarai, Kenneth Muir, UKGPCS collaborators, Johanna Schleutker, Nora Pashayan, APCB (Australian Prostate Cancer BioResource), David E. Neal, Sune F. Nielsen, Børge G. Nordestgaard, Henrik Gronberg, Fredrik Wiklund, Graham G. Giles, Christopher A. Haiman, Ruth C. Travis, Janet L. Stanford, Adam S. Kibel, Cezary Cybulski, Kay-Tee Khaw, Christiane Maier, Stephen N. Thibodeau, Manuel R. Teixeira, Lisa Cannon-Albright, Hermann Brenner, Radka Kaneva, Hardev Pandha, The PRACTICAL consortium, Srilakshmi Srinivasan, Judith Clements, Jyotsna Batra, Jong Y. Park
Published 2021-04-01