Assessment and Optimization of Explainable Machine Learning Models Applied to Transcriptomic Data

by Yongbing Zhao, Jinfeng Shao, Yan W. Asmann
Published 2022-10-01

Expression of Polarity Genes in Human Cancer

by Wan-Hsin Lin, Yan W. Asmann, Panos Z. Anastasiadis
Published 2015-03-01

Expression of Polarity Genes in Human Cancer

by Wan-Hsin Lin, Yan W. Asmann, Panos Z. Anastasiadis
Published 2015-01-01

Network approaches for omics studies of neurodegenerative diseases

by Na Zhao, Zachary Quicksall, Yan W. Asmann, Yingxue Ren
Published 2022-09-01

Differential expression of microRNAs in tumors from chronically inflamed or genetic (APC(Min/+)) models of colon cancer.

by Brian M Necela, Jennifer M Carr, Yan W Asmann, E Aubrey Thompson
Published 2011-04-01

Circulating Extracellular RNA Markers of Liver Regeneration.

by Irene K Yan, Xue Wang, Yan W Asmann, Hiroaki Haga, Tushar Patel
Published 2016-01-01

c-Myc regulates self-renewal in bronchoalveolar stem cells.

by Jie Dong, Shari Sutor, Guoqian Jiang, Yajun Cao, Yan W Asmann, Dennis A Wigle
Published 2011-01-01

MicroRNA networks in mouse lung organogenesis.

by Jie Dong, Guoqian Jiang, Yan W Asmann, Sandra Tomaszek, Jin Jen, Thomas Kislinger, Dennis A Wigle
Published 2010-01-01

Inflation of tumor mutation burden by tumor-only sequencing in under-represented groups

by Yan W. Asmann, Kaushal Parikh, P. Leif Bergsagel, Haidong Dong, Alex A. Adjei, Mitesh J. Borad, Aaron S. Mansfield
Published 2021-03-01

Gene transcription changes in asthmatic chronic rhinosinusitis with nasal polyps and comparison to those in atopic dermatitis.

by Douglas A Plager, Jane C Kahl, Yan W Asmann, Allan E Nilson, John F Pallanch, Oren Friedman, Hirohito Kita
Published 2010-07-01

ABCA7 Regulates Brain Fatty Acid Metabolism During LPS-Induced Acute Inflammation

by Tomonori Aikawa, Yingxue Ren, Marie-Louise Holm, Yan W. Asmann, Amer Alam, Michael L. Fitzgerald, Guojun Bu, Takahisa Kanekiyo
Published 2021-04-01

Effect of testosterone on insulin stimulated IRS1 Ser phosphorylation in primary rat myotubes--a potential model for PCOS-related insulin resistance.

by Michael C Allemand, Brian A Irving, Yan W Asmann, Katherine A Klaus, Laura Tatpati, Charles C Coddington, K Sreekumaran Nair
Published 2009-01-01

Comprehensive profiling of cancer neoantigens from aberrant RNA splicing

by Yi Lin, Yan W Asmann, Barath Shreeder, Keith L Knutson, Erik Jessen, Daniel P Wickland, Colton McNinch, Brian Necela
Published 2024-05-01

Deconvolution reveals cell-type-specific transcriptomic changes in the aging mouse brain

by Yingxue Ren, Xue Wang, Shuwen Zhang, Hongru Hu, Zachary Quicksall, Sangderk Lee, Josh M. Morganti, Lance A. Johnson, Yan W. Asmann, Na Zhao
Published 2023-10-01

Clinical Correlates of Autosomal Chromosomal Abnormalities in an Electronic Medical Record–Linked Genome-Wide Association Study

by Hayan Jouni M.D., Khader Shameer Ph.D., Yan W. Asmann Ph.D., Ribhi Hazin M.D., Mariza de Andrade Ph.D., Iftikhar J. Kullo M.D.
Published 2013-10-01

A tissue biomarker panel predicting systemic progression after PSA recurrence post-definitive prostate cancer therapy.

by Tohru Nakagawa, Thomas M Kollmeyer, Bruce W Morlan, S Keith Anderson, Eric J Bergstralh, Brian J Davis, Yan W Asmann, George G Klee, Karla V Ballman, Robert B Jenkins
Published 2008-01-01

TMEM106B haplotypes have distinct gene expression patterns in aged brain

by Yingxue Ren, Marka van Blitterswijk, Mariet Allen, Minerva M. Carrasquillo, Joseph S. Reddy, Xue Wang, Thomas G. Beach, Dennis W. Dickson, Nilüfer Ertekin-Taner, Yan W. Asmann, Rosa Rademakers
Published 2018-07-01

HLA class-I and class-II restricted neoantigen loads predict overall survival in breast cancer

by Yingxue Ren, Yesesri Cherukuri, Daniel P. Wickland, Vivekananda Sarangi, Shulan Tian, Jodi M. Carter, Aaron S. Mansfield, Matthew S. Block, Mark E. Sherman, Keith L. Knutson, Yi Lin, Yan W. Asmann
Published 2020-01-01

Role of PLEXIND1/TGFβ Signaling Axis in Pancreatic Ductal Adenocarcinoma Progression Correlates with the Mutational Status of <i>KRAS</i>

by Sneha Vivekanandhan, Vijay S. Madamsetty, Ramcharan Singh Angom, Shamit Kumar Dutta, Enfeng Wang, Thomas Caulfield, Alexandre A. Pletnev, Rosanna Upstill-Goddard, Yan W. Asmann, David Chang, Mark R. Spaller, Debabrata Mukhopadhyay
Published 2021-08-01

Human Cerebrospinal Fluid Modulates Pathways Promoting Glioblastoma Malignancy

by Anna Carrano, Natanael Zarco, Jordan Phillipps, Montserrat Lara-Velazquez, Paola Suarez-Meade, Emily S. Norton, Emily S. Norton, Emily S. Norton, Kaisorn L. Chaichana, Alfredo Quiñones-Hinojosa, Yan W. Asmann, Hugo Guerrero-Cázares
Published 2021-03-01