FastQ Screen: A tool for multi-genome mapping and quality control [version 2; referees: 4 approved]

by Steven W. Wingett, Simon Andrews
Published 2018-09-01

FastQ Screen: A tool for multi-genome mapping and quality control [version 1; referees: 2 approved, 1 approved with reservations]

by Steven W. Wingett, Simon Andrews
Published 2018-08-01

Cluster Flow: A user-friendly bioinformatics workflow tool [version 2; referees: 3 approved]

by Philip Ewels, Felix Krueger, Max Käller, Simon Andrews
Published 2017-05-01

Cluster Flow: A user-friendly bioinformatics workflow tool [version 1; referees: 3 approved]

by Philip Ewels, Felix Krueger, Max Käller, Simon Andrews
Published 2016-12-01

Librarian: A quality control tool to analyse sequencing library compositions [version 1; peer review: 1 approved, 2 approved with reservations]

by Caroline Gaud, Simon Andrews, Kartavya Vashishtha, Christel Krueger
Published 2022-09-01

Librarian: A quality control tool to analyse sequencing library compositions [version 2; peer review: 1 approved, 2 approved with reservations]

by Caroline Gaud, Simon Andrews, Kartavya Vashishtha, Christel Krueger
Published 2024-01-01

Effect of Superovulation Treatment on Oocyte’s DNA Methylation

by Jordana S. Lopes, Elena Ivanova, Salvador Ruiz, Simon Andrews, Gavin Kelsey, Pilar Coy
Published 2022-12-01

Identification of Suitable Biomarkers for Stress and Emotion Detection for Future Personal Affective Wearable Sensors

by Abdulaziz Zamkah, Terence Hui, Simon Andrews, Nilanjan Dey, Fuqian Shi, R. Simon Sherratt
Published 2020-04-01

HiCUP: pipeline for mapping and processing Hi-C data [version 1; referees: 2 approved, 1 approved with reservations]

by Steven Wingett, Philip Ewels, Mayra Furlan-Magaril, Takashi Nagano, Stefan Schoenfelder, Peter Fraser, Simon Andrews
Published 2015-11-01

Correction to: Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

by Nelly Olova, Felix Krueger, Simon Andrews, David Oxley, Rebecca V. Berrens, Miguel R. Branco, Wolf Reik
Published 2019-02-01

Local Chromatin Features Including PU.1 and IKAROS Binding and H3K4 Methylation Shape the Repertoire of Immunoglobulin Kappa Genes Chosen for V(D)J Recombination

by Louise S. Matheson, Daniel J. Bolland, Peter Chovanec, Felix Krueger, Simon Andrews, Hashem Koohy, Anne E. Corcoran
Published 2017-11-01

Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

by Nelly Olova, Felix Krueger, Simon Andrews, David Oxley, Rebecca V. Berrens, Miguel R. Branco, Wolf Reik
Published 2018-03-01

Malnutrition and Gut Microbiota in Children

by Ishawu Iddrisu, Andrea Monteagudo-Mera, Carlos Poveda, Simone Pyle, Muhammad Shahzad, Simon Andrews, Gemma Emily Walton
Published 2021-08-01

Mechanisms and function of de novo DNA methylation in placental development reveals an essential role for DNMT3B

by Simon Andrews, Christel Krueger, Maravillas Mellado-Lopez, Myriam Hemberger, Wendy Dean, Vicente Perez-Garcia, Courtney W. Hanna
Published 2023-01-01

Histone modifications form a cell-type-specific chromosomal bar code that persists through the cell cycle

by John A. Halsall, Simon Andrews, Felix Krueger, Charlotte E. Rutledge, Gabriella Ficz, Wolf Reik, Bryan M. Turner
Published 2021-02-01

High-throughput analysis of calcium signalling kinetics in astrocytes stimulated with different neurotransmitters.

by Laura R James, Simon Andrews, Simon Walker, Paula R S de Sousa, Aaron Ray, Noah A Russell, Tomas C Bellamy
Published 2011-01-01

IL-7R signaling activates widespread VH and DH gene usage to drive antibody diversity in bone marrow B cells

by Amanda Baizan-Edge, Bryony A. Stubbs, Michael J.T. Stubbington, Daniel J. Bolland, Kristina Tabbada, Simon Andrews, Anne E. Corcoran
Published 2021-07-01

Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes.

by Cassandra R Farthing, Gabriella Ficz, Ray Kit Ng, Chun-Fung Chan, Simon Andrews, Wendy Dean, Myriam Hemberger, Wolf Reik
Published 2008-06-01

Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in mouse muscle stem cells

by Irene Hernando-Herraez, Brendan Evano, Thomas Stubbs, Pierre-Henri Commere, Marc Jan Bonder, Stephen Clark, Simon Andrews, Shahragim Tajbakhsh, Wolf Reik
Published 2019-09-01

MYC activation and BCL2L11 silencing by a tumour virus through the large-scale reconfiguration of enhancer-promoter hubs

by C David Wood, Hildegonda Veenstra, Sarika Khasnis, Andrea Gunnell, Helen M Webb, Claire Shannon-Lowe, Simon Andrews, Cameron S Osborne, Michelle J West
Published 2016-08-01