Phylogenetic analysis of glucosyltransferases and implications for the coevolution of mutans streptococci with their mammalian hosts.

by Silvia Argimón, Alexander V Alekseyenko, Rob DeSalle, Page W Caufield
Published 2013-01-01

Rectal Colonization and Nosocomial Transmission of Carbapenem-Resistant Acinetobacter baumannii in an Intensive Care Unit, Southwest Nigeria

by Erkison Ewomazino Odih, Erkison Ewomazino Odih, Emmanuel Oladayo Irek, Temitope O. Obadare, Anderson O. Oaikhena, Ayorinde O. Afolayan, Anthony Underwood, Anthony Underwood, Anthony T. Adenekan, Veronica O. Ogunleye, Silvia Argimon, Silvia Argimon, Anders Dalsgaard, David M. Aanensen, David M. Aanensen, Iruka N. Okeke, A. Oladipo Aboderin
Published 2022-03-01

Genomic Epidemiology of CC30 Methicillin-Resistant Staphylococcus aureus Strains from Argentina Reveals Four Major Clades with Distinctive Genetic Features

by Sabrina Di Gregorio, María Sol Haim, Jesús Vielma Vallenilla, Victoria Cohen, Lucía Rago, Lucía Gulone, David M. Aanensen, Silvia Argimón, Marta Mollerach
Published 2021-04-01

Novel multidrug-resistant sublineages of Staphylococcus aureus clonal complex 22 discovered in India

by Monica I. Abrudan, Varun Shamanna, Akshatha Prasanna, Anthony Underwood, Silvia Argimón, Geetha Nagaraj, Sabrina Di Gregorio, Vandana Govindan, Ashwini Vasanth, Sravani Dharmavaram, Mihir Kekre, David M. Aanensen, K. L. Ravikumar
Published 2023-10-01

Diversity and Dissemination of Methicillin-Resistant <i>Staphylococcus aureus</i> (MRSA) Genotypes in Southeast Asia

by Nurul Amirah Mohamad Farook, Silvia Argimón, Muttaqillah Najihan Abdul Samat, Sharifah Azura Salleh, Sunita Sulaiman, Toh Leong Tan, Petrick Periyasamy, Chee Lan Lau, Zalina Ismail, Nor Azila Muhammad Azami, Mia Yang Ang, Hui-min Neoh
Published 2022-12-01

A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch

by Silvia Argimón, Corin A. Yeats, Richard J. Goater, Khalil Abudahab, Benjamin Taylor, Anthony Underwood, Leonor Sánchez-Busó, Vanessa K. Wong, Zoe A. Dyson, Satheesh Nair, Se Eun Park, Florian Marks, Andrew J. Page, Jacqueline A. Keane, Stephen Baker, Kathryn E. Holt, Gordon Dougan, David M. Aanensen
Published 2021-05-01

High Genetic Diversity of Carbapenem-Resistant Acinetobacter baumannii Isolates Recovered in Nigerian Hospitals in 2016 to 2020

by Erkison Ewomazino Odih, Anderson O. Oaikhena, Anthony Underwood, Yaovi Mahuton Gildas Hounmanou, Oyinlola O. Oduyebo, Abayomi Fadeyi, Aaron O. Aboderin, Veronica O. Ogunleye, Silvia Argimón, Vitus Nnaemeka Akpunonu, Phillip O. Oshun, Abiodun Egwuenu, Tochi J. Okwor, Chikwe Ihekweazu, David M. Aanensen, Anders Dalsgaard, Iruka N. Okeke
Published 2023-06-01

A community-driven resource for genomic epidemiology and antimicrobial resistance prediction of Neisseria gonorrhoeae at Pathogenwatch

by Leonor Sánchez-Busó, Corin A. Yeats, Benjamin Taylor, Richard J. Goater, Anthony Underwood, Khalil Abudahab, Silvia Argimón, Kevin C. Ma, Tatum D. Mortimer, Daniel Golparian, Michelle J. Cole, Yonatan H. Grad, Irene Martin, Brian H. Raphael, William M. Shafer, Katy Town, Teodora Wi, Simon R. Harris, Magnus Unemo, David M. Aanensen
Published 2021-04-01

Genomic characterization of invasive typhoidal and non-typhoidal Salmonella in southwestern Nigeria.

by Odion O Ikhimiukor, Anderson O Oaikhena, Ayorinde O Afolayan, Abayomi Fadeyi, Aderemi Kehinde, Veronica O Ogunleye, Aaron O Aboderin, Oyinlola O Oduyebo, Charles J Elikwu, Erkison Ewomazino Odih, Ifeoluwa Komolafe, Silvia Argimón, Abiodun Egwuenu, Ini Adebiyi, Oluwadamilola A Sadare, Tochi Okwor, Mihir Kekre, Anthony Underwood, Chikwe Ihekweazu, David M Aanensen, Iruka N Okeke
Published 2022-08-01

Integrating whole-genome sequencing within the National Antimicrobial Resistance Surveillance Program in the Philippines

by Silvia Argimón, Melissa A. L. Masim, June M. Gayeta, Marietta L. Lagrada, Polle K. V. Macaranas, Victoria Cohen, Marilyn T. Limas, Holly O. Espiritu, Janziel C. Palarca, Jeremiah Chilam, Manuel C. Jamoralin, Alfred S. Villamin, Janice B. Borlasa, Agnettah M. Olorosa, Lara F. T. Hernandez, Karis D. Boehme, Benjamin Jeffrey, Khalil Abudahab, Charmian M. Hufano, Sonia B. Sia, John Stelling, Matthew T. G. Holden, David M. Aanensen, Celia C. Carlos
Published 2020-06-01

Whole-genome sequencing as part of national and international surveillance programmes for antimicrobial resistance: a roadmap

by Iruka N Okeke, Ben Taylor, Celia Carlos, Nicole Wheeler, Marietta Lagrada, Polle K. Macaranas, Agnettah M. Olorosa, June Gayeta, Melissa Ana Masim, Elmer M. Herrera, David M Aanensen, Khalil Abudahab, Monica Abrudan, Silvia Argimon, Harry Harste, Mihir Kekre, Ali Molloy, Dawn Muddyman, Anneke Schmider, Anthony Underwood, María del Pilar Donado Godoy, Johan Fabian Bernal Morales, Alejandra Arevalo, Maria Fernanda Valencia Guerrero, Erik Cristopher Dustin Osma Castro, Anderson O. Oaikhena, Ayorinde Oluwatobiloba Afolayan, Jolaade J Ajiboye, Ravikumar K. L., Geetha Nagaraj, Varun Shammana, Vandana Govindan, Akshata Prabhu, Darmavaram Sravani, Shincy M. R., Rajitha G. V., Carolin Vegvari, John Stelling
Published 2020-11-01

The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa

by Se Eun Park, Duy Thanh Pham, Christine Boinett, Vanessa K. Wong, Gi Deok Pak, Ursula Panzner, Ligia Maria Cruz Espinoza, Vera von Kalckreuth, Justin Im, Heidi Schütt-Gerowitt, John A. Crump, Robert F. Breiman, Yaw Adu-Sarkodie, Ellis Owusu-Dabo, Raphaël Rakotozandrindrainy, Abdramane Bassiahi Soura, Abraham Aseffa, Nagla Gasmelseed, Karen H. Keddy, Jürgen May, Amy Gassama Sow, Peter Aaby, Holly M. Biggs, Julian T. Hertz, Joel M. Montgomery, Leonard Cosmas, Beatrice Olack, Barry Fields, Nimako Sarpong, Tsiriniaina Jean Luco Razafindrabe, Tiana Mirana Raminosoa, Leon Parfait Kabore, Emmanuel Sampo, Mekonnen Teferi, Biruk Yeshitela, Muna Ahmed El Tayeb, Arvinda Sooka, Christian G. Meyer, Ralf Krumkamp, Denise Myriam Dekker, Anna Jaeger, Sven Poppert, Adama Tall, Aissatou Niang, Morten Bjerregaard-Andersen, Sandra Valborg Løfberg, Hye Jin Seo, Hyon Jin Jeon, Jessica Fung Deerin, Jinkyung Park, Frank Konings, Mohammad Ali, John D. Clemens, Peter Hughes, Juliet Nsimire Sendagala, Tobias Vudriko, Robert Downing, Usman N. Ikumapayi, Grant A. Mackenzie, Stephen Obaro, Silvia Argimon, David M. Aanensen, Andrew Page, Jacqueline A. Keane, Sebastian Duchene, Zoe Dyson, Kathryn E. Holt, Gordon Dougan, Florian Marks, Stephen Baker
Published 2018-11-01

Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes

by Megan E Carey, Zoe A Dyson, Danielle J Ingle, Afreenish Amir, Mabel K Aworh, Marie Anne Chattaway, Ka Lip Chew, John A Crump, Nicholas A Feasey, Benjamin P Howden, Karen H Keddy, Mailis Maes, Christopher M Parry, Sandra Van Puyvelde, Hattie E Webb, Ayorinde Oluwatobiloba Afolayan, Anna P Alexander, Shalini Anandan, Jason R Andrews, Philip M Ashton, Buddha Basnyat, Ashish Bavdekar, Isaac I Bogoch, John D Clemens, Kesia Esther da Silva, Anuradha De, Joep de Ligt, Paula Lucia Diaz Guevara, Christiane Dolecek, Shanta Dutta, Marthie M Ehlers, Louise Francois Watkins, Denise O Garrett, Gauri Godbole, Melita A Gordon, Andrew R Greenhill, Chelsey Griffin, Madhu Gupta, Rene S Hendriksen, Robert S Heyderman, Yogesh Hooda, Juan Carlos Hormazabal, Odion O Ikhimiukor, Junaid Iqbal, Jobin John Jacob, Claire Jenkins, Dasaratha Ramaiah Jinka, Jacob John, Gagandeep Kang, Abdoulie Kanteh, Arti Kapil, Abhilasha Karkey, Samuel Kariuki, Robert A Kingsley, Roshine Mary Koshy, AC Lauer, Myron M Levine, Ravikumar Kadahalli Lingegowda, Stephen P Luby, Grant Austin Mackenzie, Tapfumanei Mashe, Chisomo Msefula, Ankur Mutreja, Geetha Nagaraj, Savitha Nagaraj, Satheesh Nair, Take K Naseri, Susana Nimarota-Brown, Elisabeth Njamkepo, Iruka N Okeke, Sulochana Putli Bai Perumal, Andrew J Pollard, Agila Kumari Pragasam, Firdausi Qadri, Farah N Qamar, Sadia Isfat Ara Rahman, Savitra Devi Rambocus, David A Rasko, Pallab Ray, Roy Robins-Browne, Temsunaro Rongsen-Chandola, Jean Pierre Rutanga, Samir K Saha, Senjuti Saha, Karnika Saigal, Mohammad Saiful Islam Sajib, Jessica C Seidman, Jivan Shakya, Varun Shamanna, Jayanthi Shastri, Rajeev Shrestha, Sonia Sia, Michael J Sikorski, Ashita Singh, Anthony M Smith, Kaitlin A Tagg, Dipesh Tamrakar, Arif Mohammed Tanmoy, Maria Thomas, Mathew S Thomas, Robert Thomsen, Nicholas R Thomson, Siaosi Tupua, Krista Vaidya, Mary Valcanis, Balaji Veeraraghavan, François-Xavier Weill, Jackie Wright, Gordon Dougan, Silvia Argimón, Jacqueline A Keane, David M Aanensen, Stephen Baker, Kathryn E Holt, Global Typhoid Genomics Consortium Group Authorship
Published 2023-09-01