Junction of the redox dynamic, orchestra of signaling, and altered metabolism in regulation of T- cell lymphoma

by Shantanu Singh, Akhilendra Kumar Maurya
Published 2023-05-01

Identification of a visualized web-based nomogram for overall survival prediction in patients with limited stage small cell lung cancer

by Min Liang, Mafeng Chen, Shantanu Singh, Shivank Singh
Published 2023-09-01

A cross-sectional assessment of stress, coping, and burnout in the final-year medical undergraduate students

by Shantanu Singh, Jyoti Prakash, R C Das, Kalpana Srivastava
Published 2016-01-01

A visualized dynamic prediction model for overall survival in patients diagnosed with brain metastases from lung squamous cell carcinoma

by Min Liang, Mafeng Chen, Shantanu Singh, Shivank Singh, Caijian Zhou
Published 2023-06-01

Construction of a Prognostic Model in Lung Adenocarcinoma Based on Ferroptosis-Related Genes

by Min Liang, Mafeng Chen, Yinghua Zhong, Shivank Singh, Shantanu Singh
Published 2021-09-01

Capturing single-cell heterogeneity via data fusion improves image-based profiling

by Mohammad H. Rohban, Hamdah S. Abbasi, Shantanu Singh, Anne E. Carpenter
Published 2019-05-01

Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic.

by Yuen Ler Chow, Shantanu Singh, Anne E Carpenter, Gregory P Way
Published 2022-02-01

Evolutionary design of optimal surface topographies for biomaterials

by Aliaksei Vasilevich, Aurélie Carlier, David A. Winkler, Shantanu Singh, Jan de Boer
Published 2020-12-01

Amniotic membrane for treating chronic cutaneous ulcers: A systematic review and meta-analysis of randomized controlled trials

by Xinglong Liang, Li Zhou, Jun Yan, Shivank Singh, Shantanu Singh, Ching-Wen Chien, Tao-Hsin Tung
Published 2020-01-01

Systematic morphological profiling of human gene and allele function via Cell Painting

by Mohammad Hossein Rohban, Shantanu Singh, Xiaoyun Wu, Julia B Berthet, Mark-Anthony Bray, Yashaswi Shrestha, Xaralabos Varelas, Jesse S Boehm, Anne E Carpenter
Published 2017-03-01

Morphological Profiles of RNAi-Induced Gene Knockdown Are Highly Reproducible but Dominated by Seed Effects.

by Shantanu Singh, Xiaoyun Wu, Vebjorn Ljosa, Mark-Anthony Bray, Federica Piccioni, David E Root, John G Doench, Jesse S Boehm, Anne E Carpenter
Published 2015-01-01

Predicting compound activity from phenotypic profiles and chemical structures

by Nikita Moshkov, Tim Becker, Kevin Yang, Peter Horvath, Vlado Dancik, Bridget K. Wagner, Paul A. Clemons, Shantanu Singh, Anne E. Carpenter, Juan C. Caicedo
Published 2023-04-01

High-content microscopy reveals a morphological signature of bortezomib resistance

by Megan E Kelley, Adi Y Berman, David R Stirling, Beth A Cimini, Yu Han, Shantanu Singh, Anne E Carpenter, Tarun M Kapoor, Gregory P Way
Published 2023-09-01

Designed Surface Topographies Control ICAM-1 Expression in Tonsil-Derived Human Stromal Cells

by Aliaksei S. Vasilevich, Frédéric Mourcin, Anouk Mentink, Frits Hulshof, Nick Beijer, Yiping Zhao, Marloes Levers, Bernke Papenburg, Shantanu Singh, Anne E. Carpenter, Dimitrios Stamatialis, Clemens van Blitterswijk, Karin Tarte, Jan de Boer
Published 2018-06-01

Learning representations for image-based profiling of perturbations

by Nikita Moshkov, Michael Bornholdt, Santiago Benoit, Matthew Smith, Claire McQuin, Allen Goodman, Rebecca A. Senft, Yu Han, Mehrtash Babadi, Peter Horvath, Beth A. Cimini, Anne E. Carpenter, Shantanu Singh, Juan C. Caicedo
Published 2024-02-01

CellProfiler 3.0: Next-generation image processing for biology.

by Claire McQuin, Allen Goodman, Vasiliy Chernyshev, Lee Kamentsky, Beth A Cimini, Kyle W Karhohs, Minh Doan, Liya Ding, Susanne M Rafelski, Derek Thirstrup, Winfried Wiegraebe, Shantanu Singh, Tim Becker, Juan C Caicedo, Anne E Carpenter
Published 2018-07-01

Systematic, multiparametric analysis of Mycobacterium tuberculosis intracellular infection offers insight into coordinated virulence.

by Amy K Barczak, Roi Avraham, Shantanu Singh, Samantha S Luo, Wei Ran Zhang, Mark-Anthony Bray, Amelia E Hinman, Matthew Thompson, Raymond M Nietupski, Aaron Golas, Paul Montgomery, Michael Fitzgerald, Roger S Smith, Dylan W White, Anna D Tischler, Anne E Carpenter, Deborah T Hung
Published 2017-05-01

High-dimensional phenotyping to define the genetic basis of cellular morphology

by Matthew Tegtmeyer, Jatin Arora, Samira Asgari, Beth A. Cimini, Ajay Nadig, Emily Peirent, Dhara Liyanage, Gregory P. Way, Erin Weisbart, Aparna Nathan, Tiffany Amariuta, Kevin Eggan, Marzieh Haghighi, Steven A. McCarroll, Luke O’Connor, Anne E. Carpenter, Shantanu Singh, Ralda Nehme, Soumya Raychaudhuri
Published 2024-01-01

Reference compounds for characterizing cellular injury in high-content cellular morphology assays

by Jayme L. Dahlin, Bruce K. Hua, Beth E. Zucconi, Shawn D. Nelson, Shantanu Singh, Anne E. Carpenter, Jonathan H. Shrimp, Evelyne Lima-Fernandes, Mathias J. Wawer, Lawrence P. W. Chung, Ayushi Agrawal, Mary O’Reilly, Dalia Barsyte-Lovejoy, Magdalena Szewczyk, Fengling Li, Parnian Lak, Matthew Cuellar, Philip A. Cole, Jordan L. Meier, Tim Thomas, Jonathan B. Baell, Peter J. Brown, Michael A. Walters, Paul A. Clemons, Stuart L. Schreiber, Bridget K. Wagner
Published 2023-03-01

In vitro neutrophil migration is associated with inhaled corticosteroid treatment and serum cytokines in pediatric asthma

by Solveig Lemmel, Markus Weckmann, Markus Weckmann, Markus Weckmann, Anna Wohlers, Adan Chari Jirmo, Ruth Grychtol, Isabell Ricklefs, Isabell Ricklefs, Gyde Nissen, Gyde Nissen, Anna Bachmann, Shantanu Singh, Juan Caicedo, Thomas Bahmer, Thomas Bahmer, Gesine Hansen, Erika Von Mutius, Klaus F. Rabe, Oliver Fuchs, Oliver Fuchs, Oliver Fuchs, Anna-Maria Dittrich, Bianca Schaub, Christine Happle, Anne E. Carpenter, Matthias Volkmar Kopp, Matthias Volkmar Kopp, Matthias Volkmar Kopp, Tim Becker, Tim Becker, Tim Becker, the ALLIANCE Study Group as part of the German Centre for Lung Research (DZL), Mustafa Abdo, Miguel Alcazar, Thomas Bahmer, Mira Berbig, Heike Biller, Xenia Bovermann, Folke Brinkmann, Mifflin-Rae Calveron, Adan Chari Jirmo, David S. DeLuca, Gesa Diekmann, Anna-Maria Dittrich, Christian Dopfer, Markus Ege, Svenja Foth, Oliver Fuchs, Svenja Gaedcke, Karoline I. Gaede, Ruth Grychtol, Anika Habener, Gesine Hansen, Christine Happle, Christian Herzmann, Alexander Hose, Sabina Illi, Anne-Marie Kirsten, Naschla Kohistani-Greif, Inke R. König, Silke Van Koningsbruggen-Rietschel, Matthias V. Kopp, Johanna Kurz, Katja Landgraf-Rauf, Kristina Laubhahn, Lena Liboschik, Claudia Liebl, Berrit Liselotte Husstedt, Bin Liu, Nicole Maison, Aydin Malik, Carola Marzi, Meike Meyer, Erika Von Mutius, Gyde Nissen, Catharina Nitsche, Frauke Pedersen, Mareike Price, Klaus F. Rabe, Harald Renz, Isabell Ricklefs, Ernst Rietschel, Barbara Roesler, Bianca Schaub, Christina Schauberger, Tom Schildberg, Carsten Schmidt-Weber, Nicolaus Schwerk, Chrysanthi Skevaki, Alena Steinmetz, Laila Sultansei, Marlen Szewczyk, Dominik Thiele, Vera Veith, Gesche Voigt, Benjamin Waschki, Henrik Watz, Stefanie Weber, Markus Weckmann, Nils Welchering, Esther Zeitlmann, Ulrich Zissler
Published 2022-10-01