Integrating sequence and structural biology with DAS

by Finn Robert D, Kulesha Eugene, Down Thomas A, Prlić Andreas, Kähäri Andreas, Hubbard Tim JP
Published 2007-09-01

Integration of open access literature into the RCSB Protein Data Bank using BioLit

by Bourne Philip E, Rose Peter W, Yukich Benjamin T, Beran Bojan, Dimitropoulos Dimitris, Martinez Marco A, Prlić Andreas, Fink J Lynn
Published 2010-04-01

Integrating biological data – the Distributed Annotation System

by Jones Philip, Jimenez Rafael C, Hubbard Tim JP, Hermjakob Henning, Finn Robert D, Down Thomas, Blankenburg Hagen, Birney Ewan, Albrecht Mario, Jenkinson Andrew M, Kähäri Andreas, Kulesha Eugene, Macías José R, Reeves Gabrielle A, Prlić Andreas
Published 2008-07-01

Recon3D enables a three-dimensional view of gene variation in human metabolism.

by Brunk, Elizabeth, Sahoo, Swagatika, Zielinski, Daniel C, Altunkaya, Ali, Dräger, Andreas, Mih, Nathan, Gatto, Francesco, Nilsson, Avlant, Preciat Gonzalez, German Andres, Aurich, Maike Kathrin, Prlić, Andreas, Sastry, Anand, Danielsdottir, Anna D, Heinken, Almut, Noronha, Alberto, Rose, Peter W, Burley, Stephen K, Fleming, Ronan MT, Nielsen, Jens, Thiele, Ines, Palsson, Bernhard O
Published 2018

Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm

by Bliven, Spencer E., Lafita, Aleix, Rose, Peter W., Capitani, Guido, Prlić, Andreas, Bourne, Philip E.
Published 2019

Pre-calculated protein structure alignments at the RCSB PDB website.

by Prlic, Andreas, Bliven, Spencer, Rose, Peter W, Bluhm, Wolfgang F, Bizon, Chris, Godzik, Adam, Bourne, Philip E
Published 2010

Integrating sequence and structural biology with DAS.

by Prlić, Andreas, Down, Thomas A, Kulesha, Eugene, Finn, Robert D, Kähäri, Andreas, Hubbard, Tim JP
Published 2011

BioJava: an open-source framework for bioinformatics in 2012.

by Prlić, Andreas, Yates, Andrew, Bliven, Spencer E, Rose, Peter W, Jacobsen, Julius, Troshin, Peter V, Chapman, Mark, Gao, Jianjiong, Koh, Chuan Hock, Foisy, Sylvain, Holland, Richard, Rimsa, Gediminas, Heuer, Michael L, Brandstätter-Müller, H, Bourne, Philip E, Willis, Scooter
Published 2012

rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence Comparison.

by Hahn, Lars, Leimeister, Chris-André, Ounit, Rachid, Lonardi, Stefano, Morgenstern, Burkhard
Published 2016

Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: A proposed framework

by Glusman, Gustavo, Rose, Peter W., Prlić, Andreas, Dougherty, Jennifer, Duarte, Jose M., Hoffman, Andrew S., Barton, Geoffrey J., Bendixen, Emøke, Bergquist, Timothy, Bock, Christian, Brunk, Elizabeth, Burley, Stephen K., Cai, Binghuang, Carter, Hannah, Gao, JianJiong, Godzik, Adam, Heuer, Michael, Hicks, Michael, Hrabe, Thomas, Karchin, Rachel, Koehler Leman, Julia, Lane, Lydie, Masica, David L., Mooney, Sean D., Moult, John, Omenn, Gilbert S., Pearl, Frances, Pejaver, Vikas, Reynolds, Sheila M., Rokem, Ariel, Schwede, Torsten, Song, Sicheng, Tilgner, Hagen, Valasatava, Yana, Zhang, Yang, Deutsch, Eric W.
Published 2017

GA4GH: International policies and standards for data sharing across genomic research and healthcare.

by Rehm, Heidi L, Page, Angela JH, Smith, Lindsay, Adams, Jeremy B, Alterovitz, Gil, Babb, Lawrence J, Barkley, Maxmillian P, Baudis, Michael, Beauvais, Michael JS, Beck, Tim, Beckmann, Jacques S, Beltran, Sergi, Bernick, David, Bernier, Alexander, Bonfield, James K, Boughtwood, Tiffany F, Bourque, Guillaume, Bowers, Sarion R, Brookes, Anthony J, Brudno, Michael, Brush, Matthew H, Bujold, David, Burdett, Tony, Buske, Orion J, Cabili, Moran N, Cameron, Daniel L, Carroll, Robert J, Casas-Silva, Esmeralda, Chakravarty, Debyani, Chaudhari, Bimal P, Chen, Shu Hui, Cherry, J Michael, Chung, Justina, Cline, Melissa, Clissold, Hayley L, Cook-Deegan, Robert M, Courtot, Mélanie, Cunningham, Fiona, Cupak, Miro, Davies, Robert M, Denisko, Danielle, Doerr, Megan J, Dolman, Lena I, Dove, Edward S, Dursi, L Jonathan, Dyke, Stephanie OM, Eddy, James A, Eilbeck, Karen, Ellrott, Kyle P, Fairley, Susan, Fakhro, Khalid A, Firth, Helen V, Fitzsimons, Michael S, Fiume, Marc, Flicek, Paul, Fore, Ian M, Freeberg, Mallory A, Freimuth, Robert R, Fromont, Lauren A, Fuerth, Jonathan, Gaff, Clara L, Gan, Weiniu, Ghanaim, Elena M, Glazer, David, Green, Robert C, Griffith, Malachi, Griffith, Obi L, Grossman, Robert L, Groza, Tudor, Auvil, Jaime M Guidry, Guigó, Roderic, Gupta, Dipayan, Haendel, Melissa A, Hamosh, Ada, Hansen, David P, Hart, Reece K, Hartley, Dean Mitchell, Haussler, David, Hendricks-Sturrup, Rachele M, Ho, Calvin WL, Hobb, Ashley E, Hoffman, Michael M, Hofmann, Oliver M, Holub, Petr, Hsu, Jacob Shujui, Hubaux, Jean-Pierre, Hunt, Sarah E, Husami, Ammar, Jacobsen, Julius O, Jamuar, Saumya S, Janes, Elizabeth L, Jeanson, Francis, Jené, Aina, Johns, Amber L, Joly, Yann, Jones, Steven JM, Kanitz, Alexander, Kato, Kazuto, Keane, Thomas M, Kekesi-Lafrance, Kristina, Kelleher, Jerome, Kerry, Giselle, Khor, Seik-Soon, Knoppers, Bartha M, Konopko, Melissa A, Kosaki, Kenjiro, Kuba, Martin, Lawson, Jonathan, Leinonen, Rasko, Li, Stephanie, Lin, Michael F, Linden, Mikael, Liu, Xianglin, Udara Liyanage, Isuru, Lopez, Javier, Lucassen, Anneke M, Lukowski, Michael, Mann, Alice L, Marshall, John, Mattioni, Michele, Metke-Jimenez, Alejandro, Middleton, Anna, Milne, Richard J, Molnár-Gábor, Fruzsina, Mulder, Nicola, Munoz-Torres, Monica C, Nag, Rishi, Nakagawa, Hidewaki, Nasir, Jamal, Navarro, Arcadi, Nelson, Tristan H, Niewielska, Ania, Nisselle, Amy, Niu, Jeffrey, Nyrönen, Tommi H, O'Connor, Brian D, Oesterle, Sabine, Ogishima, Soichi, Wang, Vivian Ota, Paglione, Laura AD, Palumbo, Emilio, Parkinson, Helen E, Philippakis, Anthony A, Pizarro, Angel D, Prlic, Andreas, Rambla, Jordi, Rendon, Augusto, Rider, Renee A, Robinson, Peter N, Rodarmer, Kurt W, Rodriguez, Laura Lyman, Rubin, Alan F, Rueda, Manuel, Rushton, Gregory A, Ryan, Rosalyn S, Saunders, Gary I, Schuilenburg, Helen, Schwede, Torsten, Scollen, Serena, Senf, Alexander, Sheffield, Nathan C, Skantharajah, Neerjah, Smith, Albert V, Sofia, Heidi J, Spalding, Dylan, Spurdle, Amanda B, Stark, Zornitza, Stein, Lincoln D, Suematsu, Makoto, Tan, Patrick, Tedds, Jonathan A, Thomson, Alastair A, Thorogood, Adrian, Tickle, Timothy L, Tokunaga, Katsushi, Törnroos, Juha, Torrents, David, Upchurch, Sean, Valencia, Alfonso, Guimera, Roman Valls, Vamathevan, Jessica, Varma, Susheel, Vears, Danya F, Viner, Coby, Voisin, Craig, Wagner, Alex H, Wallace, Susan E, Walsh, Brian P, Williams, Marc S, Winkler, Eva C, Wold, Barbara J, Wood, Grant M, Woolley, J Patrick, Yamasaki, Chisato, Yates, Andrew D, Yung, Christina K, Zass, Lyndon J, Zaytseva, Ksenia, Zhang, Junjun, Goodhand, Peter, North, Kathryn, Birney, Ewan
Published 2022