Sequencing Strategies to Guide Decision Making in Cancer Treatment.

by James T Topham, Marco A Marra
Published 2016-12-01

The Drivers, Mechanisms, and Consequences of Genome Instability in HPV-Driven Cancers

by Vanessa L. Porter, Marco A. Marra
Published 2022-09-01

Next-Generation Sequencing Approaches in Cancer: Where Have They Brought Us and Where Will They Take Us?

by Veronique G. LeBlanc, Marco A. Marra
Published 2015-09-01

Oncogenic Viruses and the Epigenome: How Viruses Hijack Epigenetic Mechanisms to Drive Cancer

by Signe A. MacLennan, Marco A. Marra
Published 2023-05-01

Combinatorial and Machine Learning Approaches for Improved Somatic Variant Calling From Formalin-Fixed Paraffin-Embedded Genome Sequence Data

by Dollina D. Dodani, Matthew H. Nguyen, Ryan D. Morin, Ryan D. Morin, Marco A. Marra, Marco A. Marra, Richard D. Corbett
Published 2022-04-01

Biomechanical Consequences of Tibial Insert Thickness after Total Knee Arthroplasty: A Musculoskeletal Simulation Study

by Periklis Tzanetis, Marco A. Marra, René Fluit, Bart Koopman, Nico Verdonschot
Published 2021-03-01

A seriation approach for visualization-driven discovery of co-expression patterns in Serial Analysis of Gene Expression (SAGE) data.

by Olena Morozova, Vyacheslav Morozov, Brad G Hoffman, Cheryl D Helgason, Marco A Marra
Published 2008-01-01

Management and visualization of whole genome shotgun assemblies using SAM

by René L. Warren, Yaron S. Butterfield, Ryan D. Morin, Asim S. Siddiqui, Marco A. Marra, Steven J.M. Jones
Published 2005-05-01

TRIM25 promotes Capicua degradation independently of ERK in the absence of ATXN1L

by Derek Wong, Lisa Sogerer, Samantha S. Lee, Victor Wong, Amy Lum, Adrian B. Levine, Marco A. Marra, Stephen Yip
Published 2020-10-01

Gait symmetry and hip strength in women with developmental dysplasia following hip arthroplasty compared to healthy subjects: A cross-sectional study.

by Ruud A Leijendekkers, Marco A Marra, Sjoerd Kolk, Geert van Bon, B Wim Schreurs, Vivian Weerdesteyn, Nico Verdonschot
Published 2018-01-01

Genome-wide detection of imprinted differentially methylated regions using nanopore sequencing

by Vahid Akbari, Jean-Michel Garant, Kieran O'Neill, Pawan Pandoh, Richard Moore, Marco A Marra, Martin Hirst, Steven JM Jones
Published 2022-07-01

Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase

by Vahid Akbari, Jean-Michel Garant, Kieran O’Neill, Pawan Pandoh, Richard Moore, Marco A. Marra, Martin Hirst, Steven J. M. Jones
Published 2021-02-01

The Drosophila TIPE family member Sigmar interacts with the Ste20-like kinase Misshapen and modulates JNK signaling, cytoskeletal remodeling and autophagy

by Suganthi Chittaranjan, Jing Xu, Michael Kuzyk, Harpreet K. Dullat, James Wilton, Lindsay DeVorkin, Chandra Lebovitz, Gregg B. Morin, Marco A. Marra, Sharon M. Gorski
Published 2015-07-01

Cost-Effectiveness of Molecularly Guided Treatment in Diffuse Large B-Cell Lymphoma (DLBCL) in Patients under 60

by Dean A. Regier, Brandon Chan, Sarah Costa, David W. Scott, Christian Steidl, Joseph M. Connors, Aly Karsan, Marco A. Marra, Robert Kridel, Ian Cromwell, Samantha Pollard
Published 2022-02-01

Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing

by Ryan D. Morin, Matthew Bainbridge, Anthony Fejes, Martin Hirst, Martin Krzywinski, Trevor J. Pugh, Helen McDonald, Richard Varhol, Steven J.M. Jones, Marco A. Marra
Published 2008-07-01

Twist1 transcriptional targets in the developing atrio-ventricular canal of the mouse.

by Pavle Vrljicak, Rebecca Cullum, Eric Xu, Alex C Y Chang, Elizabeth D Wederell, Mikhail Bilenky, Steven J M Jones, Marco A Marra, Aly Karsan, Pamela A Hoodless
Published 2012-01-01

Precursor States of Brain Tumor Initiating Cell Lines Are Predictive of Survival in Xenografts and Associated with Glioblastoma Subtypes

by Carlo Cusulin, Charles Chesnelong, Pinaki Bose, Misha Bilenky, Karen Kopciuk, Jennifer A. Chan, J. Gregory Cairncross, Steven J. Jones, Marco A. Marra, H. Artee Luchman, Samuel Weiss
Published 2015-07-01

Rearrangement-mediated cis-regulatory alterations in advanced patient tumors reveal interactions with therapy

by Yiqun Zhang, Fengju Chen, Erin Pleasance, Laura Williamson, Cameron J. Grisdale, Emma Titmuss, Janessa Laskin, Steven J.M. Jones, Isidro Cortes-Ciriano, Marco A. Marra, Chad J. Creighton
Published 2021-11-01

Matching methods in precision oncology: An introduction and illustrative example

by Deirdre Weymann, Janessa Laskin, Steven J.M. Jones, Howard Lim, Daniel J. Renouf, Robyn Roscoe, Kasmintan A. Schrader, Sophie Sun, Stephen Yip, Marco A. Marra, Dean A. Regier
Published 2021-01-01

Characterization of the contradictory chromatin signatures at the 3' exons of zinc finger genes.

by Kimberly R Blahnik, Lei Dou, Lorigail Echipare, Sushma Iyengar, Henriette O'Geen, Erica Sanchez, Yongjun Zhao, Marco A Marra, Martin Hirst, Joseph F Costello, Ian Korf, Peggy J Farnham
Published 2011-02-01