Spatio-Temporal Areal Unit Modeling in R with Conditional Autoregressive Priors Using the CARBayesST Package

by Duncan Lee, Alastair Rushworth, Gary Napier
Published 2018-04-01

Large-scale genomic analysis of Mycobacterium tuberculosis reveals extent of target and compensatory mutations linked to multi-drug resistant tuberculosis

by Gary Napier, Susana Campino, Jody E. Phelan, Taane G. Clark
Published 2023-01-01

A modified decision tree approach to improve the prediction and mutation discovery for drug resistance in Mycobacterium tuberculosis

by Wouter Deelder, Gary Napier, Susana Campino, Luigi Palla, Jody Phelan, Taane G. Clark
Published 2022-01-01

Comparison of in silico predicted Mycobacterium tuberculosis spoligotypes and lineages from whole genome sequencing data

by Gary Napier, David Couvin, Guislaine Refrégier, Christophe Guyeux, Conor J. Meehan, Christophe Sola, Susana Campino, Jody Phelan, Taane G. Clark
Published 2023-07-01

Robust barcoding and identification of Mycobacterium tuberculosis lineages for epidemiological and clinical studies

by Gary Napier, Susana Campino, Yared Merid, Markos Abebe, Yimtubezinash Woldeamanuel, Abraham Aseffa, Martin L. Hibberd, Jody Phelan, Taane G. Clark
Published 2020-12-01

Genetic diversity of candidate loci linked to Mycobacterium tuberculosis resistance to bedaquiline, delamanid and pretomanid

by Paula J. Gómez-González, Joao Perdigao, Pedro Gomes, Zully M. Puyen, David Santos-Lazaro, Gary Napier, Martin L. Hibberd, Miguel Viveiros, Isabel Portugal, Susana Campino, Jody E. Phelan, Taane G. Clark
Published 2021-09-01

Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan

by Anwar Sheed Khan, Jody E. Phelan, Muhammad Tahir Khan, Sajid Ali, Muhammad Qasim, Gary Napier, Susana Campino, Sajjad Ahmad, Otavio Marques Cabral, Shulin Zhang, Hazir Rahman, Dong-Qing Wei, Taane G. Clark, Taj Ali Khan
Published 2021-07-01

Author Correction: Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan

by Anwar Sheed Khan, Jody E. Phelan, Muhammad Tahir Khan, Sajid Ali, Muhammad Qasim, Gary Napier, Susana Campino, Sajjad Ahmad, Otavio Cabral-Marques, Shulin Zhang, Hazir Rahman, Dong-Qing Wei, Taane G. Clark, Taj Ali Khan
Published 2021-07-01

Characterisation of drug-resistant Mycobacterium tuberculosis mutations and transmission in Pakistan

by Gary Napier, Anwar Sheed Khan, Abdul Jabbar, Muhammad Tahir Khan, Sajid Ali, Muhammad Qasim, Noor Mohammad, Rumina Hasan, Zahra Hasan, Susana Campino, Sajjad Ahmad, Baharullah Khattak, Simon J. Waddell, Taj Ali Khan, Jody E. Phelan, Taane G. Clark
Published 2022-05-01