Determinants of Follow-Up Participation in the Internet-Based European Influenza Surveillance Platform Influenzanet

by Bajardi, Paolo, Vespignani, Alessandro, Funk, Sebastian, Eames, Ken TD, Edmunds, W John, Turbelin, Clément, Debin, Marion, Colizza, Vittoria, Smallenburg, Ronald, Koppeschaar, Carl E, Franco, Ana O, Faustino, Vitor, Carnahan, Annasara, Rehn, Moa, Paolotti, Daniela
Published 2014-03-01

Correction: Practical considerations for measuring the effective reproductive number, Rt

by Gostic, Katelyn M., McGough, Lauren, Baskerville, Edward B., Abbott, Sam, Joshi, Keya, Tedijanto, Christine, Kahn, Rebecca, Niehus, Rene, Hay, James A., De Salazar, Pablo M., Hellewell, Joel, Meakin, Sophie, Munday, James D., Bosse, Nikos I., Sherrat, Katharine, Thompson, Robin N., White, Laura F., Huisman, Jana S., Scire, Jérémie, Bonhoeffer, Sebastian, Stadler, Tanja, Wallinga, Jacco, Funk, Sebastian, Lipsitch, Marc, Cobey, Sarah
Published 2021

Modeling infectious disease dynamics in the complex landscape of global health.

by Heesterbeek, Hans, Anderson, Roy M, Andreasen, Viggo, Bansal, Shweta, De Angelis, Daniela, Dye, Chris, Eames, Ken TD, Edmunds, W John, Frost, Simon DW, Funk, Sebastian, Hollingsworth, T Deirdre, House, Thomas, Isham, Valerie, Klepac, Petra, Lessler, Justin, Lloyd-Smith, James O, Metcalf, C Jessica E, Mollison, Denis, Pellis, Lorenzo, Pulliam, Juliet RC, Roberts, Mick G, Viboud, Cecile, Isaac Newton Institute IDD Collaboration
Published 2018

Nine challenges in modelling the emergence of novel pathogens.

by Lloyd-Smith, James O, Funk, Sebastian, McLean, Angela R, Riley, Steven, Wood, James LN
Published 2015

Contact tracing is an imperfect tool for controlling COVID-19 transmission and relies on population adherence

by Davis, Emma L., Lucas, Tim C. D., Borlase, Anna, Pollington, Timothy M., Abbott, Sam, Ayabina, Diepreye, Crellen, Thomas, Hellewell, Joel, Pi, Li, Medley, Graham F., Hollingsworth, T. Déirdre, Klepac, Petra, Lowe, Rachel, Endo, Akira, Davies, Nicholas, Gore-Langton, Georgia R., Russell, Timothy W., Bosse, Nikos I., Quaife, Matthew, Kucharski, Adam J., Nightingale, Emily S., Pearson, Carl A. B., Gibbs, Hamish, O’Reilly, Kathleen, Jombart, Thibaut, Rees, Eleanor M., Deol, Arminder K., Hué, Stéphane, Auzenbergs, Megan, Houben, Rein M. G. J., Funk, Sebastian, Li, Yang, Sun, Fiona, Prem, Kiesha, Quilty, Billy J., Villabona-Arenas, Julian, Barnard, Rosanna C., Hodgson, David, Foss, Anna, Jarvis, Christopher I., Meakin, Sophie R., Eggo, Rosalind M., Abbas, Kaja, Zandvoort, Kevin van, Emery, Jon C., Tully, Damien C., Sandmann, Frank G., Edmunds, W. John, Gimma, Amy, Knight, Gwen, Munday, James D., Diamond, Charlie, Jit, Mark, Leclerc, Quentin, Rosello, Alicia, Chan, Yung-Wai Desmond, Simons, David, Clifford, Sam, Flasche, Stefan, Procter, Simon R., Atkins, Katherine E.
Published 2021

Genomic reconstruction of the SARS-CoV-2 epidemic in England.

by Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V, Gonçalves, Sonia, Jackson, David K, Johnston, Ian, Jung, Alexander W, Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Wellcome Sanger Institute COVID-19 Surveillance Team, COVID-19 Genomics UK (COG-UK) Consortium*, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C, Gerstung, Moritz
Published 2022

Genomic reconstruction of the SARS-CoV-2 epidemic in England.

by Vöhringer, Harald S, Sanderson, Theo, Sinnott, Matthew, De Maio, Nicola, Nguyen, Thuy, Goater, Richard, Schwach, Frank, Harrison, Ian, Hellewell, Joel, Ariani, Cristina V, Gonçalves, Sonia, Jackson, David K, Johnston, Ian, Jung, Alexander W, Saint, Callum, Sillitoe, John, Suciu, Maria, Goldman, Nick, Panovska-Griffiths, Jasmina, Wellcome Sanger Institute COVID-19 Surveillance Team, COVID-19 Genomics UK (COG-UK) Consortium*, Birney, Ewan, Volz, Erik, Funk, Sebastian, Kwiatkowski, Dominic, Chand, Meera, Martincorena, Inigo, Barrett, Jeffrey C, Gerstung, Moritz
Published 2021

Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England.

by Davies, Nicholas G, Abbott, Sam, Barnard, Rosanna C, Jarvis, Christopher I, Kucharski, Adam J, Munday, James D, Pearson, Carl AB, Russell, Timothy W, Tully, Damien C, Washburne, Alex D, Wenseleers, Tom, Gimma, Amy, Waites, William, Wong, Kerry LM, van Zandvoort, Kevin, Silverman, Justin D, CMMID COVID-19 Working Group, COVID-19 Genomics UK (COG-UK) Consortium, Diaz-Ordaz, Karla, Keogh, Ruth, Eggo, Rosalind M, Funk, Sebastian, Jit, Mark, Atkins, Katherine E, Edmunds, W John
Published 2021

Key questions for modelling COVID-19 exit strategies.

by Thompson, Robin N, Hollingsworth, T Déirdre, Isham, Valerie, Arribas-Bel, Daniel, Ashby, Ben, Britton, Tom, Challenor, Peter, Chappell, Lauren HK, Clapham, Hannah, Cunniffe, Nik J, Dawid, A Philip, Donnelly, Christl A, Eggo, Rosalind M, Funk, Sebastian, Gilbert, Nigel, Glendinning, Paul, Gog, Julia R, Hart, William S, Heesterbeek, Hans, House, Thomas, Keeling, Matt, Kiss, István Z, Kretzschmar, Mirjam E, Lloyd, Alun L, McBryde, Emma S, McCaw, James M, McKinley, Trevelyan J, Miller, Joel C, Morris, Martina, O'Neill, Philip D, Parag, Kris V, Pearson, Carl AB, Pellis, Lorenzo, Pulliam, Juliet RC, Ross, Joshua V, Tomba, Gianpaolo Scalia, Silverman, Bernard W, Struchiner, Claudio J, Tildesley, Michael J, Trapman, Pieter, Webb, Cerian R, Mollison, Denis, Restif, Olivier
Published 2020

Changes in UK hospital mortality in the first wave of COVID-19: the ISARIC WHO Clinical Characterisation Protocol prospective multicentre observational cohort study

by Tom, Brian, Docherty, Annemarie, Mulholland, Rachel, Lone, Nazir, Cheyne, Christopher, De Angelis, Daniela, Diaz-Ordaz, Karla, Donegan, Cara, Drake, Thomas, Dunning, Jake, Funk, Sebastian, Garcia-Finana, Marta, Girvan, Michelle, Hardwick, Hayley, Harrison, Janet, Ho, Antonia, Hughes, David, Keogh, Ruth, Kirwan, Peter, Leeming, Gary, Nguyen-Van-Tam, Jonathan, Pius, Riinu, Russell, Clark, Spencer, Rebecca, Turtle, Lance, Openshaw, Peter, Baillie, Kenneth, Harrison, Ewen, Semple, Malcom
Published 2021

Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UK.

by Docherty, Annemarie B, Mulholland, Rachel H, Lone, Nazir I, Cheyne, Christopher P, De Angelis, Daniela, Diaz-Ordaz, Karla, Donegan, Cara, Drake, Thomas M, Dunning, Jake, Funk, Sebastian, García-Fiñana, Marta, Girvan, Michelle, Hardwick, Hayley E, Harrison, Janet, Ho, Antonia, Hughes, David M, Keogh, Ruth H, Kirwan, Peter D, Leeming, Gary, Nguyen Van-Tam, Jonathan S, Pius, Riinu, Russell, Clark D, Spencer, Rebecca G, Tom, Brian Dm, Turtle, Lance, Openshaw, Peter Jm, Baillie, J Kenneth, Harrison, Ewen M, Semple, Malcolm G
Published 2021

Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study.

by Nyberg, Tommy, Ferguson, Neil M, Nash, Sophie G, Webster, Harriet H, Flaxman, Seth, Andrews, Nick, Hinsley, Wes, Bernal, Jamie Lopez, Kall, Meaghan, Bhatt, Samir, Blomquist, Paula, Zaidi, Asad, Volz, Erik, Aziz, Nurin Abdul, Harman, Katie, Funk, Sebastian, Abbott, Sam, COVID-19 Genomics UK (COG-UK) consortium, Hope, Russell, Charlett, Andre, Chand, Meera, Ghani, Azra C, Seaman, Shaun, Dabrera, Gavin, De Angelis, Daniela, Presanis, Anne, Thelwall, Simon
Published 2022

Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study.

by Nyberg, Tommy, Ferguson, Neil M, Nash, Sophie G, Webster, Harriet H, Flaxman, Seth, Andrews, Nick, Hinsley, Wes, Bernal, Jamie Lopez, Kall, Meaghan, Bhatt, Samir, Blomquist, Paula, Zaidi, Asad, Volz, Erik, Aziz, Nurin Abdul, Harman, Katie, Funk, Sebastian, Abbott, Sam, COVID-19 Genomics UK (COG-UK) consortium, Hope, Russell, Charlett, Andre, Chand, Meera, Ghani, Azra C, Seaman, Shaun R, Dabrera, Gavin, De Angelis, Daniela, Presanis, Anne M, Thelwall, Simon
Published 2022