Detection of transmission clusters of HIV-1 subtype C over a 21-year period in Cape Town, South Africa.

by Eduan Wilkinson, Susan Engelbrecht, Tulio de Oliveira
Published 2014-01-01

The geography and inter-community configuration of new sexual partnership formation in a rural South African population over fourteen years (2003-2016).

by Hae-Young Kim, Diego Cuadros, Eduan Wilkinson, Dennis M Junqueira, Tulio de Oliveira, Frank Tanser
Published 2022-01-01

Persistent Hepatitis B Viraemia with Polymerase Mutations among HIV/HBV Co-Infected Patients on HBV-Active ART in KwaZulu-Natal, South Africa

by Nokukhanya Msomi, Raveen Parboosing, Eduan Wilkinson, Jennifer Giandhari, Kerusha Govender, Benjamin Chimukangara, Koleka P. Mlisana
Published 2022-04-01

The geography and inter-community configuration of new sexual partnership formation in a rural South African population over fourteen years (2003–2016)

by Hae-Young Kim, Diego Cuadros, Eduan Wilkinson, Dennis M. Junqueira, Tulio de Oliveira, Frank Tanser
Published 2022-01-01

HIV-1 subtypes B and C unique recombinant forms (URFs) and transmitted drug resistance identified in the Western Cape Province, South Africa.

by Graeme Brendon Jacobs, Eduan Wilkinson, Shahieda Isaacs, Georgina Spies, Tulio de Oliveira, Soraya Seedat, Susan Engelbrecht
Published 2014-01-01

Next Generation Sequencing and Bioinformatics Analysis of Family Genetic Inheritance

by Aquillah M. Kanzi, James Emmanuel San, Benjamin Chimukangara, Eduan Wilkinson, Maryam Fish, Veron Ramsuran, Tulio de Oliveira
Published 2020-10-01

Identifying Recent HIV Infections: From Serological Assays to Genomics

by Sikhulile Moyo, Eduan Wilkinson, Vladimir Novitsky, Alain Vandormael, Simani Gaseitsiwe, Max Essex, Susan Engelbrecht, Tulio de Oliveira
Published 2015-10-01

Combining Phylogenetic and Network Approaches to Identify HIV-1 Transmission Links in San Mateo County, California

by Sudeb C. Dalai, Sudeb C. Dalai, Dennis Maletich Junqueira, Dennis Maletich Junqueira, Eduan Wilkinson, Eduan Wilkinson, Renee Mehra, Sergei L. Kosakovsky Pond, Vivian Levy, Vivian Levy, Dennis Israelski, Dennis Israelski, Tulio de Oliveira, Tulio de Oliveira, Tulio de Oliveira, David Katzenstein
Published 2018-12-01

Genome-Wide Association Study of HIV Whole Genome Sequences Validated using Drug Resistance.

by Robert A Power, Siva Davaniah, Anne Derache, Eduan Wilkinson, Frank Tanser, Ravindra K Gupta, Deenan Pillay, Tulio de Oliveira
Published 2016-01-01

Multiple Early Introductions of SARS-CoV-2 to Cape Town, South Africa

by Susan Engelbrecht, Kayla Delaney, Bronwyn Kleinhans, Eduan Wilkinson, Houriiyah Tegally, Tania Stander, Gert van Zyl, Wolfgang Preiser, Tulio de Oliveira
Published 2021-03-01

Managing and assembling population-scale data streams, tools and workflows to plan for future pandemics within the INFORM-Africa Consortium

by Jenicca Poongavanan, Joicymara Xavier, Marcel Dunaiski, Houriiyah Tegally, Sunday O. Oladejo, Olawole Ayorinde, Eduan Wilkinson, Cheryl Baxter, Tulio de Oliveira
Published 2023-05-01

The role of high-risk geographies in the perpetuation of the HIV epidemic in rural South Africa: A spatial molecular epidemiology study.

by Diego F Cuadros, Tulio de Oliveira, Tiago Gräf, Dennis M Junqueira, Eduan Wilkinson, Philippe Lemey, Till Bärnighausen, Hae-Young Kim, Frank Tanser
Published 2022-01-01

The role of high-risk geographies in the perpetuation of the HIV epidemic in rural South Africa: A spatial molecular epidemiology study

by Diego F. Cuadros, Tulio de Oliveira, Tiago Gräf, Dennis M. Junqueira, Eduan Wilkinson, Philippe Lemey, Till Bärnighausen, Hae-Young Kim, Frank Tanser
Published 2022-01-01

Analysis of Viral Diversity in Relation to the Recency of HIV-1C Infection in Botswana.

by Sikhulile Moyo, Alain Vandormael, Eduan Wilkinson, Susan Engelbrecht, Simani Gaseitsiwe, Kenanao P Kotokwe, Rosemary Musonda, Frank Tanser, Max Essex, Vladimir Novitsky, Tulio de Oliveira
Published 2016-01-01

Consequences of rpoB mutations missed by the GenoType MTBDRplus assay in a programmatic setting in South Africa

by Nomonde R. Mvelase, Lindiwe P. Cele, Ravesh Singh, Yeshnee Naidoo, Jennifer Giandhari, Eduan Wilkinson, Tulio de Oliveira, Khine Swe Swe-Han, Koleka P. Mlisana
Published 2023-02-01

Peer-mediated HIV assisted partner services to identify and link to care HIV-positive and HCV-positive people who inject drugs: a cohort study protocol

by John Scott, Carey Farquhar, Rose Bosire, Aliza Monroe-Wise, Loice Mbogo, David Bukusi, Betsy Sambai, Peter Cherutich, Matthew Dunbar, Paul Macharia, Sarah Masyuko, Eduan Wilkinson, Natasha Ludwig-Barron, Bill Sinkele
Published 2021-04-01

Evaluation of miniaturized Illumina DNA preparation protocols for SARS-CoV-2 whole genome sequencing

by Sureshnee Pillay, James Emmanuel San, Derek Tshiabuila, Yeshnee Naidoo, Yusasha Pillay, Akhil Maharaj, Ugochukwu J. Anyaneji, Eduan Wilkinson, Houriiyah Tegally, Richard J. Lessells, Cheryl Baxter, Tulio de Oliveira, Jennifer Giandhari
Published 2023-01-01

Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq

by Derek Tshiabuila, Jennifer Giandhari, Sureshnee Pillay, Upasana Ramphal, Yajna Ramphal, Arisha Maharaj, Ugochukwu Jacob Anyaneji, Yeshnee Naidoo, Houriiyah Tegally, Emmanuel James San, Eduan Wilkinson, Richard J. Lessells, Tulio de Oliveira
Published 2022-04-01

Evaluation of miniaturized Illumina DNA preparation protocols for SARS-CoV-2 whole genome sequencing.

by Sureshnee Pillay, James Emmanuel San, Derek Tshiabuila, Yeshnee Naidoo, Yusasha Pillay, Akhil Maharaj, Ugochukwu J Anyaneji, Eduan Wilkinson, Houriiyah Tegally, Richard J Lessells, Cheryl Baxter, Tulio de Oliveira, Jennifer Giandhari
Published 2023-01-01

Molecular Epidemiology and Trends in HIV-1 Transmitted Drug Resistance in Mozambique 1999–2018

by Nalia Ismael, Eduan Wilkinson, Isabel Mahumane, Hernane Gemusse, Jennifer Giandhari, Adilson Bauhofer, Adolfo Vubil, Pirolita Mambo, Lavanya Singh, Nédio Mabunda, Dulce Bila, Susan Engelbrecht, Eduardo Gudo, Richard Lessells, Túlio de Oliveira
Published 2022-09-01