Elucidation of Early Evolution of HIV-1 Group M in the Congo Basin Using Computational Methods

by Marcel Tongo, Darren P. Martin, Jeffrey R. Dorfman
Published 2021-04-01

Patterns of recombination in HIV-1M are influenced by selection disfavouring the survival of recombinants with disrupted genomic RNA and protein structures.

by Michael Golden, Brejnev M Muhire, Yves Semegni, Darren P Martin
Published 2014-01-01

Avoidance of protein fold disruption in natural virus recombinants.

by Pierre Lefeuvre, Jean-Michel Lett, Bernard Reynaud, Darren P Martin
Published 2007-11-01

The evolutionary value of recombination is constrained by genome modularity.

by Darren P Martin, Eric van der Walt, David Posada, Edward P Rybicki
Published 2005-10-01

Recombination in Eukaryotic Single Stranded DNA Viruses

by Philippe Roumagnac, Arvind Varsani, Michael Golden, Pierre Lefeuvre, Darren P. Martin, Philippe Biagini
Published 2011-09-01

Evolutionary dynamics of ten novel Gamma-PVs: insights from phylogenetic incongruence, recombination and phylodynamic analyses

by Alltalents T. Murahwa, Fredrick Nindo, Harris Onywera, Tracy L. Meiring, Darren P. Martin, Anna-Lise Williamson
Published 2019-05-01

Recombinant Goose Circoviruses Circulating in Domesticated and Wild Geese in Poland

by Tomasz Stenzel, Daria Dziewulska, Brejnev M. Muhire, Penelope Hartnady, Simona Kraberger, Darren P. Martin, Arvind Varsani
Published 2018-03-01

Within-host dynamics of the emergence of Tomato yellow leaf curl virus recombinants.

by Cica Urbino, Serafin Gutiérrez, Anna Antolik, Nabila Bouazza, Juliette Doumayrou, Martine Granier, Darren P Martin, Michel Peterschmitt
Published 2013-01-01

Comparative genomic and phylogenetic approaches to characterize the role of genetic recombination in mycobacterial evolution.

by Silvia E Smith, Patrice Showers-Corneli, Caitlin N Dardenne, Henry H Harpending, Darren P Martin, Robert G Beiko
Published 2012-01-01

Potent Sensitisation of Cancer Cells to Anticancer Drugs by a Quadruple Mutant of the Human Deoxycytidine Kinase.

by Safiatou T Coulibaly, Paola Rossolillo, Flore Winter, Franziska K Kretzschmar, Mélanie Brayé, Darren P Martin, Daniela Lener, Matteo Negroni
Published 2015-01-01

Evolutionary time-scale of the begomoviruses: evidence from integrated sequences in the Nicotiana genome.

by Pierre Lefeuvre, Gordon W Harkins, Jean-Michel Lett, Rob W Briddon, Mark W Chase, Benoit Moury, Darren P Martin
Published 2011-01-01

Molecular mechanisms of recombination restriction in the envelope gene of the human immunodeficiency virus.

by Etienne Simon-Loriere, Roman Galetto, Meriem Hamoudi, John Archer, Pierre Lefeuvre, Darren P Martin, David L Robertson, Matteo Negroni
Published 2009-05-01

Complex recombination patterns arising during geminivirus coinfections preserve and demarcate biologically important intra-genome interaction networks.

by Darren P Martin, Pierre Lefeuvre, Arvind Varsani, Murielle Hoareau, Jean-Yves Semegni, Betty Dijoux, Claire Vincent, Bernard Reynaud, Jean-Michel Lett
Published 2011-09-01

Recent Zoonotic Spillover and Tropism Shift of a Canine Coronavirus Is Associated with Relaxed Selection and Putative Loss of Function in NTD Subdomain of Spike Protein

by Jordan D. Zehr, Sergei L. Kosakovsky Pond, Darren P. Martin, Kristina Ceres, Gary R. Whittaker, Jean K. Millet, Laura B. Goodman, Michael J. Stanhope
Published 2022-04-01

RASCL: Rapid Assessment of Selection in CLades through molecular sequence analysis.

by Alexander G Lucaci, Jordan D Zehr, Stephen D Shank, Dave Bouvier, Alexander Ostrovsky, Han Mei, Anton Nekrutenko, Darren P Martin, Sergei L Kosakovsky Pond
Published 2022-01-01

Appearances can be deceptive: revealing a hidden viral infection with deep sequencing in a plant quarantine context.

by Thierry Candresse, Denis Filloux, Brejnev Muhire, Charlotte Julian, Serge Galzi, Guillaume Fort, Pauline Bernardo, Jean-Heindrich Daugrois, Emmanuel Fernandez, Darren P Martin, Arvind Varsani, Philippe Roumagnac
Published 2014-01-01

The spread of tomato yellow leaf curl virus from the Middle East to the world.

by Pierre Lefeuvre, Darren P Martin, Gordon Harkins, Philippe Lemey, Alistair J A Gray, Sandra Meredith, Francisco Lakay, Adérito Monjane, Jean-Michel Lett, Arvind Varsani, Jahangir Heydarnejad
Published 2010-10-01

Inducible resistance to maize streak virus.

by Dionne N Shepherd, Benjamin Dugdale, Darren P Martin, Arvind Varsani, Francisco M Lakay, Marion E Bezuidenhout, Adérito L Monjane, Jennifer A Thomson, James Dale, Edward P Rybicki
Published 2014-01-01

Metagenomic-Based Screening and Molecular Characterization of Cowpea-Infecting Viruses in Burkina Faso.

by Essowè Palanga, Denis Filloux, Darren P Martin, Emmanuel Fernandez, Daniel Gargani, Romain Ferdinand, Jean Zabré, Zakaria Bouda, James Bouma Neya, Mahamadou Sawadogo, Oumar Traore, Michel Peterschmitt, Philippe Roumagnac
Published 2016-01-01

Genetic variability among complete human respiratory syncytial virus subgroup A genomes: bridging molecular evolutionary dynamics and epidemiology.

by Lydia Tan, Philippe Lemey, Lieselot Houspie, Marco C Viveen, Nicolaas J G Jansen, Anton M van Loon, Emmanuel Wiertz, Grada M van Bleek, Darren P Martin, Frank E Coenjaerts
Published 2012-01-01