In silico gene prioritization by integrating multiple data sources.

by Yixuan Chen, Wenhui Wang, Yingyao Zhou, Robert Shields, Sumit K Chanda, Robert C Elston, Jing Li
Published 2011-01-01

Metascape provides a biologist-oriented resource for the analysis of systems-level datasets

by Yingyao Zhou, Bin Zhou, Lars Pache, Max Chang, Alireza Hadj Khodabakhshi, Olga Tanaseichuk, Christopher Benner, Sumit K. Chanda
Published 2019-04-01

Identification of small molecule and genetic modulators of AON-induced dystrophin exon skipping by high-throughput screening.

by Debra A O'Leary, Orzala Sharif, Paul Anderson, Buu Tu, Genevieve Welch, Yingyao Zhou, Jeremy S Caldwell, Ingo H Engels, Achim Brinker
Published 2009-12-01

A cell-level quality control workflow for high-throughput image analysis

by Minhua Qiu, Bin Zhou, Frederick Lo, Steven Cook, Jason Chyba, Doug Quackenbush, Jason Matzen, Zhizhong Li, Puiying Annie Mak, Kaisheng Chen, Yingyao Zhou
Published 2020-07-01

Alveolar macrophages infected with Ames or Sterne strain of Bacillus anthracis elicit differential molecular expression patterns.

by Felicia D Langel, Chih-Yuan Chiang, Douglas Lane, Tara Kenny, Jenifer F Ojeda, Yang Zhong, Jianwei Che, Yingyao Zhou, Wilson Ribot, Krishna P Kota, Sina Bavari, Rekha G Panchal
Published 2014-01-01

Genome wide analysis of inbred mouse lines identifies a locus containing Ppar-gamma as contributing to enhanced malaria survival.

by Selina E R Bopp, Vandana Ramachandran, Kerstin Henson, Angelina Luzader, Merle Lindstrom, Muriel Spooner, Brian M Steffy, Oscar Suzuki, Chris Janse, Andrew P Waters, Yingyao Zhou, Tim Wiltshire, Elizabeth A Winzeler
Published 2010-05-01

A systems-based analysis of Plasmodium vivax lifecycle transcription from human to mosquito.

by Scott J Westenberger, Colleen M McClean, Rana Chattopadhyay, Neekesh V Dharia, Jane M Carlton, John W Barnwell, William E Collins, Stephen L Hoffman, Yingyao Zhou, Joseph M Vinetz, Elizabeth A Winzeler
Published 2010-04-01

A systematic map of genetic variation in Plasmodium falciparum.

by Claire Kidgell, Sarah K Volkman, Johanna Daily, Justin O Borevitz, David Plouffe, Yingyao Zhou, Jeffrey R Johnson, Karine Le Roch, Ousmane Sarr, Omar Ndir, Soulyemane Mboup, Serge Batalov, Dyann F Wirth, Elizabeth A Winzeler
Published 2006-06-01

Correction: A Systematic Map of Genetic Variation in Plasmodium falciparum.

by Claire Kidgell, Sarah K Volkman, Johanna Daily, Justin O Borevitz, David Plouffe, Yingyao Zhou, Jeffrey R Johnson, Karine G. Le Roch, Ousmane Sarr, Omar Ndir, Soulyemane Mboup, Serge Batalov, Dyann F Wirth, Elizabeth A Winzeler
Published 2006-08-01

Evidence-based annotation of the malaria parasite's genome using comparative expression profiling.

by Yingyao Zhou, Vandana Ramachandran, Kota Arun Kumar, Scott Westenberger, Phillippe Refour, Bin Zhou, Fengwu Li, Jason A Young, Kaisheng Chen, David Plouffe, Kerstin Henson, Victor Nussenzweig, Jane Carlton, Joseph M Vinetz, Manoj T Duraisingh, Elizabeth A Winzeler
Published 2008-02-01

Drug target prediction through deep learning functional representation of gene signatures

by Hao Chen, Frederick J. King, Bin Zhou, Yu Wang, Carter J. Canedy, Joel Hayashi, Yang Zhong, Max W. Chang, Lars Pache, Julian L. Wong, Yong Jia, John Joslin, Tao Jiang, Christopher Benner, Sumit K. Chanda, Yingyao Zhou
Published 2024-02-01

Proteomic Analysis of Non-human Primate Peripheral Blood Mononuclear Cells During Burkholderia mallei Infection Reveals a Role of Ezrin in Glanders Pathogenesis

by Chih-Yuan Chiang, Yang Zhong, Michael D. Ward, Douglas J. Lane, Tara Kenny, Raysa Rosario-Acevedo, Brett P. Eaton, Sylvia R. Treviño, Taylor B. Chance, Meghan Hu, Patricia L. Worsham, David M. Waag, Richard T. Moore, Lisa H. Cazares, Christopher K. Cote, Yingyao Zhou, Rekha G. Panchal
Published 2021-04-01

A broad analysis of resistance development in the malaria parasite

by Victoria C. Corey, Amanda K. Lukens, Eva S. Istvan, Marcus C. S. Lee, Virginia Franco, Pamela Magistrado, Olivia Coburn-Flynn, Tomoyo Sakata-Kato, Olivia Fuchs, Nina F. Gnädig, Greg Goldgof, Maria Linares, Maria G. Gomez-Lorenzo, Cristina De Cózar, Maria Jose Lafuente-Monasterio, Sara Prats, Stephan Meister, Olga Tanaseichuk, Melanie Wree, Yingyao Zhou, Paul A. Willis, Francisco-Javier Gamo, Daniel E. Goldberg, David A. Fidock, Dyann F. Wirth, Elizabeth A. Winzeler
Published 2016-06-01

Targeting p130Cas- and microtubule-dependent MYC regulation sensitizes pancreatic cancer to ERK MAPK inhibition

by Andrew M. Waters, Tala O. Khatib, Bjoern Papke, Craig M. Goodwin, G. Aaron Hobbs, J. Nathaniel Diehl, Runying Yang, A. Cole Edwards, Katherine H. Walsh, Rita Sulahian, James M. McFarland, Kevin S. Kapner, Thomas S.K. Gilbert, Clint A. Stalnecker, Sehrish Javaid, Anna Barkovskaya, Kajal R. Grover, Priya S. Hibshman, Devon R. Blake, Antje Schaefer, Katherine M. Nowak, Jennifer E. Klomp, Tikvah K. Hayes, Michelle Kassner, Nanyun Tang, Olga Tanaseichuk, Kaisheng Chen, Yingyao Zhou, Manpreet Kalkat, Laura E. Herring, Lee M. Graves, Linda Z. Penn, Hongwei H. Yin, Andrew J. Aguirre, William C. Hahn, Adrienne D. Cox, Channing J. Der
Published 2021-06-01

Metascape provides a biologist-oriented resource for the analysis of systems-level datasets.

by Zhou, Yingyao, Zhou, Bin, Pache, Lars, Chang, Max, Khodabakhshi, Alireza Hadj, Tanaseichuk, Olga, Benner, Christopher, Chanda, Sumit K
Published 2019

In vivo transcriptional profiling of Plasmodium falciparum

by Daily, Johanna P, Le Roch, Karine G, Sarr, Ousmane, Fang, Xuemin, Zhou, Yingyao, Ndir, Omar, Mboup, Soulyemane, Sultan, Ali, Winzeler, Elizabeth A, Wirth, Dyann Fergus
Published 2010

A Systematic Map of Genetic Variation in Plasmodium falciparum

by Kidgell, Claire, Daily, Johanna, Borevitz, Justin O, Plouffe, David, Zhou, Yingyao, Le Roch, Karine G., Ndir, Omar, Mboup, Soulyemane, Batalov, Serge, Winzeler, Elizabeth A, Volkman, Sarah K., Johnson, Jeffrey R., Sarr, Ousmane, Wirth, Dyann Fergus
Published 2010