Transposable element distribution, abundance and role in genome size variation in the genus <it>Oryza</it>

by Collura Kristi, Kim HyeRan, Yu Yeisoo, Talag Jayson, Sebastian Aswathy, Zuccolo Andrea, Kudrna Dave, Wing Rod A
Published 2007-08-01

Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis

by Wing Rod A, SanMiguel Phillip J, Yu Yeisoo, Lin Feng, Yu Yanjun, Tian Zhixi, McCouch Susan R, Ma Jianxin, Jackson Scott A
Published 2011-03-01

Construction of a bacterial artificial chromosome library from the spikemoss <it>Selaginella moellendorffii</it>: a new resource for plant comparative genomics

by Chapple Clint, Carlson John, Arumuganathan K, Mueller Christopher, Kudrna Dave, Weng Jing-Ke, Kim Hye Ran, Sisneros Nicholas, Luo Meizhong, Tanurdzic Milos, Wang Wenming, de Pamphilis Claude, Mandoli Dina, Tomkins Jeff, Wing Rod A, Banks Jo Ann
Published 2005-06-01

Advancing <it>Eucalyptus </it>genomics: identification and sequencing of lignin biosynthesis genes from deep-coverage BAC libraries

by Kudrna David, Ammiraju Jetty SS, Song Xiang, Grattapaglia Dario, Fonseca Paulo GS, Brommonschenkel Sérgio, San-Clemente Hélène, Santos Mauro D, Vautrin Sonia, Prat Elisa, Paiva Jorge AP, Wing Rod A, Freitas Ana T, Bergès Hélène, Grima-Pettenati Jacqueline
Published 2011-03-01

Construction of a nurse shark (<it>Ginglymostoma cirratum</it>) bacterial artificial chromosome (BAC) library and a preliminary genome survey

by Inoko Hidetoshi, Yanagiya Kazuyo, Grim Suzanne M, Buckingham E Bryan, Zuccolo Andrea, Collura Kristi, Mueller Christopher, Lee So-Jeong, Sisneros Nicholas B, Kudrna Dave, Kim HyeRan, Luo Meizhong, Shiina Takashi, Flajnik Martin F, Wing Rod A, Ohta Yuko
Published 2006-05-01

Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains

by Bharti Arvind K, Collura Kristi, Ammiraju Jetty SS, Kim HyeRan, Kudrna David, Sisneros Nicholas, Talag Jayson, He Ruifeng, Estill James, Estep Matt, Ma Jianxin, Luo Meizhong, Nelson William, Messing Joachim, Wing Rod A, SanMiguel Phillip, Bennetzen Jeffrey L, Soderlund Carol
Published 2008-12-01

Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus <it>Oryza </it>and in <it>Sorghum</it>

by Luo Mei, Walling Jason G, Lin Jer-Young, Gill Navdeep, Sanyal Abhijit, Rakhshan Fariborz, Zhou Bin, Hurwitz Bonnie, Klein Patricia, Stein Joshua, Goicoechea Jose-Luis, Westerman Rick, Abernathy Brian, Futrell-Griggs Montona, Hass-Jacobus Barbara L, Ammiraju Jetty, Kudrna Dave, Kim Hye, Ware Doreen, Wing Rod A, Miguel Phillip, Jackson Scott A
Published 2006-08-01

A draft physical map of a D-genome cotton species (<it>Gossypium raimondii</it>)

by Kudrna Dave, Karunakaran Santhosh, Ingles Jennifer, Grover Corrinne, Golser Wolfgang, Epps Ethan, Collura Kristi, Chicola Kristen, Chen Amy H, Braidotti Michele, Wang Xiyin, Tang Haibao, Rong Junkang, Lemke Cornelia, Kim Changsoo, Rainville Lisa K, Compton Rosana O, Estill James C, Bowers John E, Pierce Gary J, Lin Lifeng, Olive Jaime, Tabassum Nabila, Um Eareana, Wissotski Marina, Yu Yeisoo, Zuccolo Andrea, ur Rahman Mehboob, Peterson Daniel G, Wing Rod A, Wendel Jonathan F, Paterson Andrew H
Published 2010-06-01

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.

by Wang, Muhua, Yu, Yeisoo, Haberer, Georg, Marri, Pradeep Reddy, Fan, Chuanzhu, Goicoechea, Jose Luis, Zuccolo, Andrea, Song, Xiang, Kudrna, Dave, Ammiraju, Jetty SS, Cossu, Rosa Maria, Maldonado, Carlos, Chen, Jinfeng, Lee, Seunghee, Sisneros, Nick, de Baynast, Kristi, Golser, Wolfgang, Wissotski, Marina, Kim, Woojin, Sanchez, Paul, Ndjiondjop, Marie-Noelle, Sanni, Kayode, Long, Manyuan, Carney, Judith, Panaud, Olivier, Wicker, Thomas, Machado, Carlos A, Chen, Mingsheng, Mayer, Klaus FX, Rounsley, Steve, Wing, Rod A
Published 2014

Genome Sequence of the Palaeopolyploid soybean

by Schmutz, Jeremy, Cannon, Steven B., Schlueter, Jessica, Ma, Jianxin, Mitros, Therese, Nelson, William, Hyten, David L., Song, Qijian, Thelen, Jay J., Cheng, Jianlin, Xu, Dong, Hellsten, Uffe, May, Gregory D., Yu, Yeisoo, Sakura, Tetsuya, Umezawa, Taishi, Bhattacharyya, Madan K., Sandhu, Devinder, Valliyodan, Babu, Lindquist, Erika, Peto, Myron, Grant, David, Shu, Shengqiang, Goodstein, David, Barry, Kerrie, Futrell-Griggs, Montona, Abernathy, Brian, Du, Jianchang, Tian, Zhixi, Zhu, Liucun, Gill, Navdeep, Joshi, Trupti, Libault, Marc, Sethuraman, Anand, Zhang, Xue-Cheng, Shinozaki, Kazuo, Nguyen, Henry T., Wing, Rod A., Cregan, Perry, Specht, James, Grimwood, Jane, Rokhsar, Dan, Stacey, Gary, Shoemaker, Randy C., Jackson, Scott A.
Published 2009

Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement

by De Vega, Jose J., Ayling, Sarah, Hegarty, Matthew, Kudrna, Dave, Goicoechea, José L., Ergon, Åshild, Rognli, Odd A., Jones, Charlotte, Swain, Martin, Geurts, Rene, Lang, Chunting, Mayer, Klaus F.X., Rössner, Stephan, Yates, Steven, Webb, Kathleen J., Donnison, Iain S., Oldroyd, Giles E.D., Wing, Rod A., Caccamo, Mario, Powell, Wayne, Abberton, Michael T., Skøt, Leif
Published 2015

Genome-wide association mapping of date palm fruit traits

by Hazzouri, Khaled M., Gros-Balthazard, Muriel, Flowers, Jonathan M., Copetti, Dario; id_orcid0000-0002-2680-2568, Lemansour, Alain, Lebrun, Marc, Masmoudi, Khaled, Ferrand, Sylvie, Dhar, Michael I., Fresquez, Zoë A., Rosas, Ulises, Zhang, Jianwei, Talag, Jayson, Lee, Seunghee, Kudrna, David, Powell, Robyn F., Leitch, Ilia J., Krueger, Robert R., Wing, Rod A., Amiri, Khaled M. A., Purugganan, Michael D.
Published 2019

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.

by Stein, Joshua C, Yu, Yeisoo, Copetti, Dario, Zwickl, Derrick J, Zhang, Li, Zhang, Chengjun, Chougule, Kapeel, Gao, Dongying, Iwata, Aiko, Goicoechea, Jose Luis, Wei, Sharon, Wang, Jun, Liao, Yi, Wang, Muhua, Jacquemin, Julie, Becker, Claude, Kudrna, Dave, Zhang, Jianwei, Londono, Carlos EM, Song, Xiang, Lee, Seunghee, Sanchez, Paul, Zuccolo, Andrea, Ammiraju, Jetty SS, Talag, Jayson, Danowitz, Ann, Rivera, Luis F, Gschwend, Andrea R, Noutsos, Christos, Wu, Cheng-Chieh, Kao, Shu-Min, Zeng, Jhih-Wun, Wei, Fu-Jin, Zhao, Qiang, Feng, Qi, El Baidouri, Moaine, Carpentier, Marie-Christine, Lasserre, Eric, Cooke, Richard, Rosa Farias, Daniel da, da Maia, Luciano Carlos, Dos Santos, Railson S, Nyberg, Kevin G, McNally, Kenneth L, Mauleon, Ramil, Alexandrov, Nickolai, Schmutz, Jeremy, Flowers, Dave, Fan, Chuanzhu, Weigel, Detlef, Jena, Kshirod K, Wicker, Thomas, Chen, Mingsheng, Han, Bin, Henry, Robert, Hsing, Yue-Ie C, Kurata, Nori, de Oliveira, Antonio Costa, Panaud, Olivier, Jackson, Scott A, Machado, Carlos A, Sanderson, Michael J, Long, Manyuan, Ware, Doreen, Wing, Rod A
Published 2018