Accurate wisdom of the crowd from unsupervised dimension reduction

by Lingfei Wang, Tom Michoel
Published 2019-07-01

eQTLs as causal instruments for the reconstruction of hormone linked gene networks

by Sean Bankier, Tom Michoel
Published 2022-08-01

Efficient and accurate causal inference with hidden confounders from genome-transcriptome variation data.

by Lingfei Wang, Tom Michoel
Published 2017-08-01

A Graph Feature Auto-Encoder for the prediction of unobserved node features on biological networks

by Ramin Hasibi, Tom Michoel
Published 2021-10-01

High-Dimensional Bayesian Network Inference From Systems Genetics Data Using Genetic Node Ordering

by Lingfei Wang, Lingfei Wang, Lingfei Wang, Pieter Audenaert, Pieter Audenaert, Tom Michoel, Tom Michoel
Published 2019-12-01

An Integrative Approach to Infer Regulation Programs in a Transcription Regulatory Module Network

by Jianlong Qi, Tom Michoel, Gregory Butler
Published 2012-01-01

Integrative multi-omics module network inference with Lemon-Tree.

by Eric Bonnet, Laurence Calzone, Tom Michoel
Published 2015-02-01

Integration of graph neural networks and genome-scale metabolic models for predicting gene essentiality

by Ramin Hasibi, Tom Michoel, Diego A. Oyarzún
Published 2024-03-01

An Algorithm to Automatically Generate the Combinatorial Orbit Counting Equations.

by Ine Melckenbeeck, Pieter Audenaert, Tom Michoel, Didier Colle, Mario Pickavet
Published 2016-01-01

Causal Transcription Regulatory Network Inference Using Enhancer Activity as a Causal Anchor

by Deepti Vipin, Lingfei Wang, Guillaume Devailly, Tom Michoel, Anagha Joshi
Published 2018-11-01

Meta-analysis of Liver and Heart Transcriptomic Data for Functional Annotation Transfer in Mammalian Orthologs

by Pía Francesca Loren Reyes, Tom Michoel, Anagha Joshi, Guillaume Devailly
Published 2017-01-01

The Index-based Subgraph Matching Algorithm with General Symmetries (ISMAGS): exploiting symmetry for faster subgraph enumeration.

by Maarten Houbraken, Sofie Demeyer, Tom Michoel, Pieter Audenaert, Didier Colle, Mario Pickavet
Published 2014-01-01

The index-based subgraph matching algorithm (ISMA): fast subgraph enumeration in large networks using optimized search trees.

by Sofie Demeyer, Tom Michoel, Jan Fostier, Pieter Audenaert, Mario Pickavet, Piet Demeester
Published 2013-01-01

Module network inference from a cancer gene expression data set identifies microRNA regulated modules.

by Eric Bonnet, Marianthi Tatari, Anagha Joshi, Tom Michoel, Kathleen Marchal, Geert Berx, Yves Van de Peer
Published 2010-01-01

Changes in the gene expression profile during spontaneous migraine attacks

by Lisette J. A. Kogelman, Katrine Falkenberg, Alfonso Buil, Pau Erola, Julie Courraud, Susan Svane Laursen, Tom Michoel, Jes Olesen, Thomas F. Hansen
Published 2021-04-01

Plasma cortisol-linked gene networks in hepatic and adipose tissues implicate corticosteroid-binding globulin in modulating tissue glucocorticoid action and cardiovascular risk

by Sean Bankier, Sean Bankier, Sean Bankier, Lingfei Wang, Andrew Crawford, Andrew Crawford, Ruth A. Morgan, Ruth A. Morgan, Arno Ruusalepp, Arno Ruusalepp, Arno Ruusalepp, Ruth Andrew, Johan L. M. Björkegren, Johan L. M. Björkegren, Johan L. M. Björkegren, Brian R. Walker, Brian R. Walker, Tom Michoel, Tom Michoel
Published 2023-09-01

Plasma cholesterol-induced lesion networks activated before regression of early, mature, and advanced atherosclerosis.

by Johan L M Björkegren, Sara Hägg, Husain A Talukdar, Hassan Foroughi Asl, Rajeev K Jain, Cecilia Cedergren, Ming-Mei Shang, Aránzazu Rossignoli, Rabbe Takolander, Olle Melander, Anders Hamsten, Tom Michoel, Josefin Skogsberg
Published 2014-02-01

Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections.

by Siddharth Jayaraman, Claire Harris, Edith Paxton, Anne-Marie Donachie, Heli Vaikkinen, Richard McCulloch, James P J Hall, John Kenny, Luca Lenzi, Christiane Hertz-Fowler, Christina Cobbold, Richard Reeve, Tom Michoel, Liam J Morrison
Published 2019-04-01