The role of phages for microdiverse bacterial communities in proglacial stream biofilms

by Hannes Peter, Grégoire Michoud, Susheel Bhanu Busi, Susheel Bhanu Busi, Tom J. Battin
Published 2024-01-01

Integrated multi-omic analyses provide insight into colon adenoma susceptibility modulation by the gut microbiota

by Susheel Bhanu Busi, Zhentian Lei, Lloyd W. Sumner, James M. Amos-Landgraf
Published 2023-08-01

Mobilome-driven segregation of the resistome in biological wastewater treatment

by Laura de Nies, Susheel Bhanu Busi, Benoit Josef Kunath, Patrick May, Paul Wilmes
Published 2022-09-01

Evolution of the murine gut resistome following broad-spectrum antibiotic treatment

by Laura de Nies, Susheel Bhanu Busi, Mina Tsenkova, Rashi Halder, Elisabeth Letellier, Paul Wilmes
Published 2022-04-01

Cross-domain interactions confer stability to benthic biofilms in proglacial streams

by Susheel Bhanu Busi, Susheel Bhanu Busi, Hannes Peter, Jade Brandani, Tyler J. Kohler, Tyler J. Kohler, Stilianos Fodelianakis, Paraskevi Pramateftaki, Massimo Bourquin, Grégoire Michoud, Leïla Ezzat, Leïla Ezzat, Stuart Lane, Paul Wilmes, Paul Wilmes, Tom J. Battin
Published 2024-01-01

Optimised biomolecular extraction for metagenomic analysis of microbial biofilms from high-mountain streams

by Susheel Bhanu Busi, Paraskevi Pramateftaki, Jade Brandani, Stilianos Fodelianakis, Hannes Peter, Rashi Halder, Paul Wilmes, Tom J. Battin
Published 2020-10-01

PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data

by Laura de Nies, Sara Lopes, Susheel Bhanu Busi, Valentina Galata, Anna Heintz-Buschart, Cedric Christian Laczny, Patrick May, Paul Wilmes
Published 2021-02-01

The microbiome of cryospheric ecosystems

by Massimo Bourquin, Susheel Bhanu Busi, Stilianos Fodelianakis, Hannes Peter, Alex Washburne, Tyler J. Kohler, Leïla Ezzat, Grégoire Michoud, Paul Wilmes, Tom J. Battin
Published 2022-06-01

Evaluation of a Tumor-Targeting, Near-Infrared Fluorescent Peptide for Early Detection and Endoscopic Resection of Polyps in a Rat Model of Colorectal Cancer

by Jade E. Jones BHS, Susheel Bhanu Busi MS, Jonathan B. Mitchem MD, James M. Amos-Landgraf PhD, Michael R. Lewis PhD
Published 2018-07-01

Challenges, Strategies, and Perspectives for Reference-Independent Longitudinal Multi-Omic Microbiome Studies

by Susana Martínez Arbas, Susheel Bhanu Busi, Pedro Queirós, Laura de Nies, Malte Herold, Patrick May, Paul Wilmes, Paul Wilmes, Emilie E. L. Muller, Shaman Narayanasamy
Published 2021-06-01

Spatial patterns of benthic biofilm diversity among streams draining proglacial floodplains

by Jade Brandani, Hannes Peter, Susheel Bhanu Busi, Tyler J. Kohler, Stilianos Fodelianakis, Leila Ezzat, Grégoire Michoud, Massimo Bourquin, Paraskevi Pramateftaki, Matteo Roncoroni, Stuart N. Lane, Tom J. Battin
Published 2022-08-01

Patterns and Drivers of Extracellular Enzyme Activity in New Zealand Glacier-Fed Streams

by Tyler J. Kohler, Hannes Peter, Stilianos Fodelianakis, Paraskevi Pramateftaki, Michail Styllas, Matteo Tolosano, Vincent de Staercke, Martina Schön, Susheel Bhanu Busi, Paul Wilmes, Alex Washburne, Alex Washburne, Tom J. Battin
Published 2020-11-01

Glacier-Fed Stream Biofilms Harbor Diverse Resistomes and Biosynthetic Gene Clusters

by Susheel Bhanu Busi, Laura de Nies, Paraskevi Pramateftaki, Massimo Bourquin, Tyler J. Kohler, Leïla Ezzat, Stilianos Fodelianakis, Grégoire Michoud, Hannes Peter, Michail Styllas, Matteo Tolosano, Vincent De Staercke, Martina Schön, Valentina Galata, Paul Wilmes, Tom Battin
Published 2023-02-01

The dark side of the moon: first insights into the microbiome structure and function of one of the last glacier-fed streams in Africa

by Grégoire Michoud, Tyler J. Kohler, Leïla Ezzat, Hannes Peter, Juliet Kigongo Nattabi, Rosemary Nalwanga, Paraskevi Pramateftaki, Michail Styllas, Matteo Tolosano, Vincent De Staercke, Martina Schön, Ramona Marasco, Daniele Daffonchio, Massimo Bourquin, Susheel Bhanu Busi, Tom J. Battin
Published 2023-08-01

Genomic and metabolic adaptations of biofilms to ecological windows of opportunity in glacier-fed streams

by Susheel Bhanu Busi, Massimo Bourquin, Stilianos Fodelianakis, Grégoire Michoud, Tyler J. Kohler, Hannes Peter, Paraskevi Pramateftaki, Michail Styllas, Matteo Tolosano, Vincent De Staercke, Martina Schön, Laura de Nies, Ramona Marasco, Daniele Daffonchio, Leïla Ezzat, Paul Wilmes, Tom J. Battin
Published 2022-04-01

Altered infective competence of the human gut microbiome in COVID-19

by Laura de Nies, Valentina Galata, Camille Martin-Gallausiaux, Milena Despotovic, Susheel Bhanu Busi, Chantal J. Snoeck, Lea Delacour, Deepthi Poornima Budagavi, Cédric Christian Laczny, Janine Habier, Paula-Cristina Lupu, Rashi Halder, Joëlle V. Fritz, Taina Marques, Estelle Sandt, Marc Paul O’Sullivan, Soumyabrata Ghosh, Venkata Satagopam, CON-VINCE Consortium, Rejko Krüger, Guy Fagherazzi, Markus Ollert, Feng Q. Hefeng, Patrick May, Paul Wilmes
Published 2023-03-01

Co-located ecological data for exploring top- and subsoil carbon dynamics across grassland-woodland contrasts

by Sabine Reinsch, Inma Lebron, Michele Brentegani, Milo Brooks, Susheel Bhanu Busi, Claudia Cagnarini, David Cooper, John Day, Bridget A. Emmett, Eleonora Fitos, Tim Goodall, Robert Griffiths, Briony Jones, Patrick Keenan, Aidan Keith, Josiane M. Lopes-Mazzetto, Kelly E. Mason, Denise Pallett, M. Glória Pereira, Adam Pinder, David A. Robinson, Simon M. Smart, Amy Thomas, Sue Benham, Elena Vanguelova, Bernhard J. Cosby
Published 2024-05-01