Engineering Infrequent DNA Nicking Endonuclease by Fusion of a BamHI Cleavage-Deficient Mutant and a DNA Nicking Domain

by Shuang-yong Xu
Published 2022-02-01

Expression and Purification of BsaXI Restriction Endonuclease and Engineering New Specificity From BsaXI Specificity Subunit

by Sonal Gidwani, Daniel Heiter, Shuang-yong Xu
Published 2022-05-01

Polymerase-endonuclease amplification reaction (PEAR) for large-scale enzymatic production of antisense oligonucleotides.

by Xiaolong Wang, Deming Gou, Shuang-yong Xu
Published 2010-01-01

The role of the methyltransferase domain of bifunctional restriction enzyme RM.BpuSI in cleavage activity.

by Arthur Sarrade-Loucheur, Shuang-yong Xu, Siu-Hong Chan
Published 2013-01-01

Expression of Human ACE2 N-terminal Domain, Part of the Receptor for SARS-CoV-2, in Fusion With Maltose-Binding Protein, E. coli Ribonuclease I and Human RNase A

by Shuang-yong Xu, Alexey Fomenkov, Tien-Hao Chen, Erbay Yigit
Published 2021-06-01

High-throughput sequencing of EcoWI restriction fragments maps the genome-wide landscape of phosphorothioate modification at base resolution.

by Weiwei Yang, Alexey Fomenkov, Dan Heiter, Shuang-Yong Xu, Laurence Ettwiller
Published 2022-09-01

Restriction and modification of deoxyarchaeosine (dG+)-containing phage 9 g DNA

by Rebecca Tsai, Ivan R. Corrêa, Michael Y. Xu, Shuang-yong Xu
Published 2017-08-01

In vitro Type II Restriction of Bacteriophage DNA With Modified Pyrimidines

by Kiersten Flodman, Ivan R. Corrêa, Nan Dai, Peter Weigele, Shuang-yong Xu
Published 2020-10-01

Cofactor requirement of HpyAV restriction endonuclease.

by Siu-Hong Chan, Lars Opitz, Lauren Higgins, Diana O'loane, Shuang-Yong Xu
Published 2010-01-01

Erasure of Tet-Oxidized 5-Methylcytosine by a SRAP Nuclease

by Soo-Mi Kweon, Bing Zhu, Yibu Chen, L. Aravind, Shuang-Yong Xu, Douglas E. Feldman
Published 2017-10-01

NicE-seq: high resolution open chromatin profiling

by V. K. Chaithanya Ponnaluri, Guoqiang Zhang, Pierre-Olivier Estève, George Spracklin, Stephanie Sian, Shuang-yong Xu, Touati Benoukraf, Sriharsa Pradhan
Published 2017-06-01

Characterization of BisI Homologs

by Shuang-yong Xu, Elena V. Zemlyanskaya, Danila A. Gonchar, Zhiyi Sun, Peter Weigele, Alexey Fomenkov, Sergey Kh Degtyarev, Richard J. Roberts
Published 2021-07-01

Type II Restriction of Bacteriophage DNA With 5hmdU-Derived Base Modifications

by Kiersten Flodman, Rebecca Tsai, Michael Y. Xu, Ivan R. Corrêa, Alyssa Copelas, Yan-Jiun Lee, Ming-Qun Xu, Peter Weigele, Shuang-yong Xu
Published 2019-03-01

Structure determination and biochemical characterization of a putative HNH endonuclease from Geobacter metallireducens GS-15.

by Shuang-yong Xu, Alexandre P Kuzin, Jayaraman Seetharaman, Alice Gutjahr, Siu-Hong Chan, Yang Chen, Rong Xiao, Thomas B Acton, Gaetano T Montelione, Liang Tong
Published 2013-01-01

Protein Domain Guided Screen for Sequence Specific and Phosphorothioate-Dependent Restriction Endonucleases

by Thomas Lutz, Honorata Czapinska, Alexey Fomenkov, Vladimir Potapov, Daniel F. Heiter, Bo Cao, Bo Cao, Peter Dedon, Matthias Bochtler, Matthias Bochtler, Shuang-yong Xu
Published 2020-08-01

Characterization of winged helix domain fusion endonucleases as N6-methyladenine-dependent type IV restriction systems

by Igor Helbrecht, Igor Helbrecht, Igor Helbrecht, Daniel Heiter, Weiwei Yang, Tamas Vincze, Andrew Hanneman, Thomas Lutz, Laurence Ettwiller, Matthias Bochtler, Matthias Bochtler, Shuang-yong Xu
Published 2024-04-01

Balancing Herbal Medicine and Functional Food for Prevention and Treatment of Cardiometabolic Diseases through Modulating Gut Microbiota

by Ming Lyu, Ming Lyu, Yue-fei Wang, Yue-fei Wang, Guan-wei Fan, Guan-wei Fan, Guan-wei Fan, Xiao-ying Wang, Xiao-ying Wang, Shuang-yong Xu, Yan Zhu, Yan Zhu
Published 2017-11-01

The COMBREX project: design, methodology, and initial results.

by Brian P Anton, Yi-Chien Chang, Peter Brown, Han-Pil Choi, Lina L Faller, Jyotsna Guleria, Zhenjun Hu, Niels Klitgord, Ami Levy-Moonshine, Almaz Maksad, Varun Mazumdar, Mark McGettrick, Lais Osmani, Revonda Pokrzywa, John Rachlin, Rajeswari Swaminathan, Benjamin Allen, Genevieve Housman, Caitlin Monahan, Krista Rochussen, Kevin Tao, Ashok S Bhagwat, Steven E Brenner, Linda Columbus, Valérie de Crécy-Lagard, Donald Ferguson, Alexey Fomenkov, Giovanni Gadda, Richard D Morgan, Andrei L Osterman, Dmitry A Rodionov, Irina A Rodionova, Kenneth E Rudd, Dieter Söll, James Spain, Shuang-Yong Xu, Alex Bateman, Robert M Blumenthal, J Martin Bollinger, Woo-Suk Chang, Manuel Ferrer, Iddo Friedberg, Michael Y Galperin, Julien Gobeill, Daniel Haft, John Hunt, Peter Karp, William Klimke, Carsten Krebs, Dana Macelis, Ramana Madupu, Maria J Martin, Jeffrey H Miller, Claire O'Donovan, Bernhard Palsson, Patrick Ruch, Aaron Setterdahl, Granger Sutton, John Tate, Alexander Yakunin, Dmitri Tchigvintsev, Germán Plata, Jie Hu, Russell Greiner, David Horn, Kimmen Sjölander, Steven L Salzberg, Dennis Vitkup, Stanley Letovsky, Daniel Segrè, Charles DeLisi, Richard J Roberts, Martin Steffen, Simon Kasif
Published 2013-01-01

CRISPR/Cas9-Mediated Phage Resistance Is Not Impeded by the DNA Modifications of Phage T4

by Yaung, Stephanie J., Esvelt, Kevin M., Church, George M.
Published 2014

Balancing Herbal Medicine and Functional Food for Prevention and Treatment of Cardiometabolic Diseases through Modulating Gut Microbiota

by Lyu, Ming, Wang, Yue-fei, Fan, Guan-wei, Wang, Xiao-ying, Xu, Shuang-yong, Zhu, Yan
Published 2017