A reverse transcription loop-mediated isothermal amplification assay optimized to detect multiple HIV subtypes.

by Karen E Ocwieja, Scott Sherrill-Mix, Changchun Liu, Jinzhao Song, Haim Bau, Frederic D Bushman
Published 2015-01-01

Virome in immunodeficiency: what we know currently

by Hu Wang, Siqi Xu, Shuang Li, Bin Su, Scott Sherrill-Mix, Guanxiang Liang, Ting Gao, Yanjie Yin
Published 2023-11-01

Covalent Modification of Bacteriophage T4 DNA Inhibits CRISPR-Cas9

by Alexandra L. Bryson, Young Hwang, Scott Sherrill-Mix, Gary D. Wu, James D. Lewis, Lindsay Black, Tyson A. Clark, Frederic D. Bushman
Published 2015-07-01

CpG Frequency in the 5′ Third of the <italic toggle="yes">env</italic> Gene Determines Sensitivity of Primary HIV-1 Strains to the Zinc-Finger Antiviral Protein

by Dorota Kmiec, Rayhane Nchioua, Scott Sherrill-Mix, Christina M. Stürzel, Elena Heusinger, Elisabeth Braun, Marcos V. P. Gondim, Dominik Hotter, Konstantin M. J. Sparrer, Beatrice H. Hahn, Daniel Sauter, Frank Kirchhoff
Published 2020-02-01

Tracking gut microbiome and bloodstream infection in critically ill adults

by Christopher H. Gu, Layla A. Khatib, Ayannah S. Fitzgerald, Jevon Graham-Wooten, Caroline A. Ittner, Scott Sherrill-Mix, YuChung Chuang, Laurel J. Glaser, Nuala J. Meyer, Frederic D. Bushman, Ronald G. Collman
Published 2023-01-01

Tracking gut microbiome and bloodstream infection in critically ill adults.

by Christopher H Gu, Layla A Khatib, Ayannah S Fitzgerald, Jevon Graham-Wooten, Caroline A Ittner, Scott Sherrill-Mix, YuChung Chuang, Laurel J Glaser, Nuala J Meyer, Frederic D Bushman, Ronald G Collman
Published 2023-01-01

Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase.

by Kushol Gupta, Vesa Turkki, Scott Sherrill-Mix, Young Hwang, Grant Eilers, Louis Taylor, Charlene McDanal, Ping Wang, David Temelkoff, Robert T Nolte, Emile Velthuisen, Jerry Jeffrey, Gregory D Van Duyne, Frederic D Bushman
Published 2016-12-01

Optimizing methods and dodging pitfalls in microbiome research

by Dorothy Kim, Casey E. Hofstaedter, Chunyu Zhao, Lisa Mattei, Ceylan Tanes, Erik Clarke, Abigail Lauder, Scott Sherrill-Mix, Christel Chehoud, Judith Kelsen, Máire Conrad, Ronald G. Collman, Robert Baldassano, Frederic D. Bushman, Kyle Bittinger
Published 2017-05-01

Lack of detection of a human placenta microbiome in samples from preterm and term deliveries

by Jacob S. Leiby, Kevin McCormick, Scott Sherrill-Mix, Erik L. Clarke, Lyanna R. Kessler, Louis J. Taylor, Casey E. Hofstaedter, Aoife M. Roche, Lisa M. Mattei, Kyle Bittinger, Michal A. Elovitz, Rita Leite, Samuel Parry, Frederic D. Bushman
Published 2018-10-01

Comparison of SARS-CoV-2 variants of concern in primary human nasal cultures demonstrates Delta as most cytopathic and Omicron as fastest replicating

by Nikhila S. Tanneti, Anant K. Patel, Li Hui Tan, Andrew D. Marques, Ranawaka A. P. M. Perera, Scott Sherrill-Mix, Brendan J. Kelly, David M. Renner, Ronald G. Collman, Kyle Rodino, Carole Lee, Frederic D. Bushman, Noam A. Cohen, Susan R. Weiss
Published 2024-04-01

Detection of SARS-CoV-2 RNA using RT-LAMP and molecular beacons

by Scott Sherrill-Mix, Young Hwang, Aoife M. Roche, Abigail Glascock, Susan R. Weiss, Yize Li, Leila Haddad, Peter Deraska, Caitlin Monahan, Andrew Kromer, Jevon Graham-Wooten, Louis J. Taylor, Benjamin S. Abella, Arupa Ganguly, Ronald G. Collman, Gregory D. Van Duyne, Frederic D. Bushman
Published 2021-06-01

Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania

by Andrew D. Marques, Scott Sherrill-Mix, John K. Everett, Hriju Adhikari, Shantan Reddy, Julie C. Ellis, Haley Zeliff, Sabrina S. Greening, Carolyn C. Cannuscio, Katherine M. Strelau, Ronald G. Collman, Brendan J. Kelly, Kyle G. Rodino, Frederic D. Bushman, Roderick B. Gagne, Eman Anis
Published 2022-10-01

SARS-CoV-2 Genomic Variation in Space and Time in Hospitalized Patients in Philadelphia

by John Everett, Pascha Hokama, Aoife M. Roche, Shantan Reddy, Young Hwang, Lyanna Kessler, Abigail Glascock, Yize Li, Jillian N. Whelan, Susan R. Weiss, Scott Sherrill-Mix, Kevin McCormick, Samantha A. Whiteside, Jevon Graham-Wooten, Layla A. Khatib, Ayannah S. Fitzgerald, Ronald G. Collman, Frederic Bushman
Published 2021-02-01

Exposure of progressive immune dysfunction by SARS-CoV-2 mRNA vaccination in patients with chronic lymphocytic leukemia: A prospective cohort study.

by Kai Qin, Kazuhito Honjo, Scott Sherrill-Mix, Weimin Liu, Regina M Stoltz, Allisa K Oman, Lucinda A Hall, Ran Li, Sarah Sterrett, Ellen R Frederick, Jeffrey R Lancaster, Mayur Narkhede, Amitkumar Mehta, Foluso J Ogunsile, Rima B Patel, Thomas J Ketas, Victor M Cruz Portillo, Albert Cupo, Benjamin M Larimer, Anju Bansal, Paul A Goepfert, Beatrice H Hahn, Randall S Davis
Published 2023-06-01

Wild bonobos host geographically restricted malaria parasites including a putative new Laverania species

by Weimin Liu, Scott Sherrill-Mix, Gerald H. Learn, Erik J. Scully, Yingying Li, Alexa N. Avitto, Dorothy E. Loy, Abigail P. Lauder, Sesh A. Sundararaman, Lindsey J. Plenderleith, Jean-Bosco N. Ndjango, Alexander V. Georgiev, Steve Ahuka-Mundeke, Martine Peeters, Paco Bertolani, Jef Dupain, Cintia Garai, John A. Hart, Terese B. Hart, George M. Shaw, Paul M. Sharp, Beatrice H. Hahn
Published 2017-11-01

Predictors of Nonseroconversion after SARS-CoV-2 Infection

by Weimin Liu, Ronnie M. Russell, Frederic Bibollet-Ruche, Ashwin N. Skelly, Scott Sherrill-Mix, Drew A. Freeman, Regina Stoltz, Emily Lindemuth, Fang-Hua Lee, Sarah Sterrett, Katharine J. Bar, Nathaniel Erdmann, Sigrid Gouma, Scott E. Hensley, Thomas Ketas, Albert Cupo, Victor M. Cruz Portillo, John P. Moore, Paul D. Bieniasz, Theodora Hatziioannou, Greer Massey, Mary-Beth Minyard, Michael S. Saag, Randall S. Davis, George M. Shaw, William J. Britt, Sixto M. Leal, Paul Goepfert, Beatrice H. Hahn
Published 2021-09-01

Allometry and Ecology of the Bilaterian Gut Microbiome

by Scott Sherrill-Mix, Kevin McCormick, Abigail Lauder, Aubrey Bailey, Laurie Zimmerman, Yingying Li, Jean-Bosco N. Django, Paco Bertolani, Christelle Colin, John A. Hart, Terese B. Hart, Alexander V. Georgiev, Crickette M. Sanz, David B. Morgan, Rebeca Atencia, Debby Cox, Martin N. Muller, Volker Sommer, Alexander K. Piel, Fiona A. Stewart, Sheri Speede, Joe Roman, Gary Wu, Josh Taylor, Rudolf Bohm, Heather M. Rose, John Carlson, Deus Mjungu, Paul Schmidt, Celeste Gaughan, Joyslin I. Bushman, Ella Schmidt, Kyle Bittinger, Ronald G. Collman, Beatrice H. Hahn, Frederic D. Bushman
Published 2018-05-01

SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021

by Andrew D. Marques, Scott Sherrill-Mix, John K. Everett, Shantan Reddy, Pascha Hokama, Aoife M. Roche, Young Hwang, Abigail Glascock, Samantha A. Whiteside, Jevon Graham-Wooten, Layla A. Khatib, Ayannah S. Fitzgerald, Ahmed M. Moustafa, Colleen Bianco, Swetha Rajagopal, Jenna Helton, Regan Deming, Lidiya Denu, Azad Ahmed, Eimear Kitt, Susan E. Coffin, Claire Newbern, Josh Chang Mell, Paul J. Planet, Nitika Badjatia, Bonnie Richards, Zi-Xuan Wang, Carolyn C. Cannuscio, Katherine M. Strelau, Anne Jaskowiak-Barr, Leigh Cressman, Sean Loughrey, Arupa Ganguly, Michael D. Feldman, Ronald G. Collman, Kyle G. Rodino, Brendan J. Kelly, Frederic D. Bushman
Published 2022-02-01

A Germline-Targeting Chimpanzee SIV Envelope Glycoprotein Elicits a New Class of V2-Apex Directed Cross-Neutralizing Antibodies

by Frederic Bibollet-Ruche, Ronnie M. Russell, Wenge Ding, Weimin Liu, Yingying Li, Kshitij Wagh, Daniel Wrapp, Rumi Habib, Ashwin N. Skelly, Ryan S. Roark, Scott Sherrill-Mix, Shuyi Wang, Juliette Rando, Emily Lindemuth, Kendra Cruickshank, Younghoon Park, Rachel Baum, John W. Carey, Andrew Jesse Connell, Hui Li, Elena E. Giorgi, Ge S. Song, Shilei Ding, Andrés Finzi, Amanda Newman, Giovanna E. Hernandez, Emily Machiele, Derek W. Cain, Katayoun Mansouri, Mark G. Lewis, David C. Montefiori, Kevin J. Wiehe, S. Munir Alam, I-Ting Teng, Peter D. Kwong, Raiees Andrabi, Laurent Verkoczy, Dennis R. Burton, Bette T. Korber, Kevin O. Saunders, Barton F. Haynes, Robert J. Edwards, George M. Shaw, Beatrice H. Hahn
Published 2023-02-01