Removal of AU bias from microarray mRNA expression data enhances computational identification of active microRNAs.

by Ran Elkon, Reuven Agami
Published 2008-10-01

Systematic identification of functional SNPs interrupting 3'UTR polyadenylation signals.

by Eldad David Shulman, Ran Elkon
Published 2020-08-01

Genetic mapping of developmental trajectories for complex traits and diseases

by Eldad David Shulman, Ran Elkon
Published 2021-01-01

Genomic meta-analysis of the interplay between 3D chromatin organization and gene expression programs under basal and stress conditions

by Idan Nurick, Ron Shamir, Ran Elkon
Published 2018-08-01

DOMINO: a network‐based active module identification algorithm with reduced rate of false calls

by Hagai Levi, Ran Elkon, Ron Shamir
Published 2021-01-01

Incorporating regulatory interactions into gene-set analyses for GWAS data: A controlled analysis with the MAGMA tool.

by David Groenewoud, Avinoam Shye, Ran Elkon
Published 2022-03-01

Incorporating regulatory interactions into gene-set analyses for GWAS data: A controlled analysis with the MAGMA tool

by David Groenewoud, Avinoam Shye, Ran Elkon
Published 2022-03-01

Recurrent functional misinterpretation of RNA-seq data caused by sample-specific gene length bias.

by Shir Mandelboum, Zohar Manber, Orna Elroy-Stein, Ran Elkon
Published 2019-11-01

FOCS: a novel method for analyzing enhancer and gene activity patterns infers an extensive enhancer–promoter map

by Tom Aharon Hait, David Amar, Ron Shamir, Ran Elkon
Published 2018-05-01

Apolipoprotein E4 enhances brain inflammation by modulation of the NF-κB signaling cascade

by Gal Ophir, Ninette Amariglio, Jasmine Jacob-Hirsch, Ran Elkon, Gideon Rechavi, Daniel M. Michaelson
Published 2005-12-01

Matrin 3 binds and stabilizes mRNA.

by Maayan Salton, Ran Elkon, Tatiana Borodina, Aleksey Davydov, Marie-Laure Yaspo, Eran Halperin, Yosef Shiloh
Published 2011-01-01

3'UTR Shortening Potentiates MicroRNA-Based Repression of Pro-differentiation Genes in Proliferating Human Cells.

by Yonit Hoffman, Debora Rosa Bublik, Alejandro P Ugalde, Ran Elkon, Tammy Biniashvili, Reuven Agami, Moshe Oren, Yitzhak Pilpel
Published 2016-02-01

Functional CRISPR screen identifies AP1-associated enhancer regulating FOXF1 to modulate oncogene-induced senescence

by Ruiqi Han, Li Li, Alejandro Piñeiro Ugalde, Arieh Tal, Zohar Manber, Eric Pinto Barbera, Veronica Della Chiara, Ran Elkon, Reuven Agami
Published 2018-08-01

A CRISPR knockout screen reveals new regulators of canonical Wnt signaling

by Tamar Evron, Michal Caspi, Michal Kazelnik, Yarden Shor-Nareznoy, Shir Armoza-Eilat, Revital Kariv, Zohar Manber, Ran Elkon, Ella H. Sklan, Rina Rosin-Arbesfeld
Published 2021-09-01

A cell type–specific approach to elucidate the role of miR-96 in inner ear hair cells

by Kathleen Gwilliam, Michal Sperber, Katherine Perry, Kevin P. Rose, Laura Ginsberg, Nikhil Paladugu, Yang Song, Beatrice Milon, Ran Elkon, Ronna Hertzano, Ronna Hertzano, Ronna Hertzano
Published 2024-05-01

Shared and organ-specific gene-expression programs during the development of the cochlea and the superior olivary complex

by Mor Bordeynik-Cohen, Michal Sperber, Lena Ebbers, Naama Messika-Gold, Constanze Krohs, Tal Koffler-Brill, Yael Noy, Ran Elkon, Hans Gerd Nothwang, Karen B. Avraham
Published 2023-12-01

Lineage-tracing and translatomic analysis of damage-inducible mitotic cochlear progenitors identifies candidate genes regulating regeneration.

by Tomokatsu Udagawa, Patrick J Atkinson, Beatrice Milon, Julia M Abitbol, Yang Song, Michal Sperber, Elvis Huarcaya Najarro, Mirko Scheibinger, Ran Elkon, Ronna Hertzano, Alan G Cheng
Published 2021-11-01

Integration of transcriptomics, proteomics, and microRNA analyses reveals novel microRNA regulation of targets in the mammalian inner ear.

by Tal Elkan-Miller, Igor Ulitsky, Ronna Hertzano, Anya Rudnicki, Amiel A Dror, Danielle R Lenz, Ran Elkon, Martin Irmler, Johannes Beckers, Ron Shamir, Karen B Avraham
Published 2011-01-01

Cell type-specific transcriptome analysis reveals a major role for Zeb1 and miR-200b in mouse inner ear morphogenesis.

by Ronna Hertzano, Ran Elkon, Kiyoto Kurima, Annie Morrisson, Siaw-Lin Chan, Michelle Sallin, Andrew Biedlingmaier, Douglas S Darling, Andrew J Griffith, David J Eisenman, Scott E Strome
Published 2011-09-01

The LHX2-OTX2 transcriptional regulatory module controls retinal pigmented epithelium differentiation and underlies genetic risk for age-related macular degeneration.

by Mazal Cohen-Gulkar, Ahuvit David, Naama Messika-Gold, Mai Eshel, Shai Ovadia, Nitay Zuk-Bar, Maria Idelson, Yamit Cohen-Tayar, Benjamin Reubinoff, Tamar Ziv, Meir Shamay, Ran Elkon, Ruth Ashery-Padan
Published 2023-01-01