A simple grid implementation with Berkeley Open Infrastructure for Network Computing using BLAST as a model

by Watthanai Pinthong, Panya Muangruen, Prapat Suriyaphol, Dumrong Mairiang
Published 2016-07-01

Correction to: Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selec...

by Alongkorn Kurilung, Chantisa Keeratipusana, Prapat Suriyaphol, David J. Hampson, Nuvee Prapasarakul
Published 2019-03-01

Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selection

by Alongkorn Kurilung, Chantisa Keeratipusana, Prapat Suriyaphol, David J. Hampson, Nuvee Prapasarakul
Published 2019-03-01

Codon usage similarity between viral and some host genes suggests a codon-specific translational regulation

by Kunlakanya Jitobaom, Supinya Phakaratsakul, Thanyaporn Sirihongthong, Sasithorn Chotewutmontri, Prapat Suriyaphol, Ornpreya Suptawiwat, Prasert Auewarakul
Published 2020-05-01

Utilizing MALDI-TOF MS and LC-MS/MS to access serum peptidome-based biomarkers in canine oral tumors

by Sekkarin Ploypetch, Janthima Jaresitthikunchai, Narumon Phaonakrop, Walasinee Sakcamduang, Sukanya Manee-in, Prapat Suriyaphol, Sittiruk Roytrakul, Gunnaporn Suriyaphol
Published 2022-12-01

Identification of new protein interactions between dengue fever virus and its hosts, human and mosquito.

by Dumrong Mairiang, Huamei Zhang, Ann Sodja, Thilakam Murali, Prapat Suriyaphol, Prida Malasit, Thawornchai Limjindaporn, Russell L Finley
Published 2013-01-01

Accuracy of Tumour-Associated Circulating Endothelial Cells as a Screening Biomarker for Clinically Significant Prostate Cancer

by Sebastian Chakrit Bhakdi, Prapat Suriyaphol, Ponpan Thaicharoen, Sebastian Tobias Karl Grote, Chulaluk Komoltri, Bansithi Chaiyaprasithi, Komgrid Charnkaew
Published 2019-07-01

Validation of genotype imputation in Southeast Asian populations and the effect of single nucleotide polymorphism annotation on imputation outcome

by Worachart Lert-itthiporn, Bhoom Suktitipat, Harald Grove, Anavaj Sakuntabhai, Prida Malasit, Nattaya Tangthawornchaikul, Fumihiko Matsuda, Prapat Suriyaphol
Published 2018-02-01

Whole-Genome Sequencing Analysis of Serially Isolated Multi-Drug and Extensively Drug Resistant Mycobacterium tuberculosis from Thai Patients.

by Kiatichai Faksri, Jun Hao Tan, Areeya Disratthakit, Eryu Xia, Therdsak Prammananan, Prapat Suriyaphol, Chiea Chuen Khor, Yik-Ying Teo, Rick Twee-Hee Ong, Angkana Chaiprasert
Published 2016-01-01

Dynamics of the fecal microbiome and antimicrobial resistome in commercial piglets during the weaning period

by Prapat Suriyaphol, Jimmy Ka Ho Chiu, Nathamon Yimpring, Paiboon Tunsagool, Wuttichai Mhuantong, Rungtip Chuanchuen, Irina Bessarab, Rohan B. H. Williams, Rick Twee-Hee Ong, Gunnaporn Suriyaphol
Published 2021-09-01

Cooperative Interaction of Nck and Lck Orchestrates Optimal TCR Signaling

by Frederike A. Hartl, Jatuporn Ngoenkam, Esmeralda Beck-Garcia, Liz Cerqueira, Piyamaporn Wipa, Pussadee Paensuwan, Prapat Suriyaphol, Pankaj Mishra, Burkhart Schraven, Stefan Günther, Sutatip Pongcharoen, Wolfgang W. A. Schamel, Susana Minguet
Published 2021-04-01

Genomic evidence supporting the clonal expansion of extensively drug-resistant tuberculosis bacteria belonging to a rare proto-Beijing genotype

by Prapaporn Srilohasin, Therdsak Prammananan, Kiatichai Faksri, Jody E. Phelan, Prapat Suriyaphol, Phalin Kamolwat, Saijai Smithtikarn, Areeya Disratthakit, Sanjib Mani Regmi, Manoon Leechawengwongs, Rick Twee-Hee Ong, Yik Ying Teo, Sissades Tongsima, Taane G. Clark, Angkana Chaiprasert
Published 2020-01-01

Application of One-Step Reverse Transcription Droplet Digital PCR for Dengue Virus Detection and Quantification in Clinical Specimens

by Dumrong Mairiang, Adisak Songjaeng, Prachya Hansuealueang, Yuwares Malila, Paphavee Lertsethtakarn, Sasikorn Silapong, Yongyuth Poolpanichupatam, Chonticha Klungthong, Kwanrutai Chin-Inmanu, Somchai Thiemmeca, Nattaya Tangthawornchaikul, Kanokwan Sriraksa, Wannee Limpitikul, Sirijitt Vasanawathana, Damon W. Ellison, Prida Malasit, Prapat Suriyaphol, Panisadee Avirutnan
Published 2021-04-01

Joint ancestry and association test indicate two distinct pathogenic pathways involved in classical dengue fever and dengue shock syndrome.

by Marisa Oliveira, Worachart Lert-Itthiporn, Bruno Cavadas, Verónica Fernandes, Ampaiwan Chuansumrit, Orlando Anunciação, Isabelle Casademont, Fanny Koeth, Marina Penova, Kanchana Tangnararatchakit, Chiea Chuen Khor, Richard Paul, Prida Malasit, Fumihiko Matsuda, Etienne Simon-Lorière, Prapat Suriyaphol, Luisa Pereira, Anavaj Sakuntabhai
Published 2018-02-01

Comprehensive genome assembly reveals genetic diversity and carcass consumption insights in critically endangered Asian king vultures

by Wannapol Buthasane, Vorasuk Shotelersuk, Wanna Chetruengchai, Chalurmpon Srichomthong, Adjima Assawapitaksakul, Sithichoke Tangphatsornruang, Wirulda Pootakham, Chutima Sonthirod, Sissades Tongsima, Pongsakorn Wangkumhang, Alisa Wilantho, Ampika Thongphakdee, Saowaphang Sanannu, Chaianan Poksawat, Tarasak Nipanunt, Chaiyan Kasorndorkbua, Klaus-Peter Koepfli, Budhan S. Pukazhenthi, Prapat Suriyaphol, Thidathip Wongsurawat, Piroon Jenjaroenpun, Gunnaporn Suriyaphol
Published 2024-04-01

Comparative genomics and genome-wide SNPs of endangered Eld’s deer provide breeder selection for inbreeding avoidance

by Vichayanee Pumpitakkul, Wanna Chetruengchai, Chalurmpon Srichomthong, Chureerat Phokaew, Wirulda Pootakham, Chutima Sonthirod, Wanapinun Nawae, Sissades Tongsima, Pongsakorn Wangkumhang, Alisa Wilantho, Yongchai Utara, Ampika Thongpakdee, Saowaphang Sanannu, Umaporn Maikaew, Suphattharaphonnaphan Khuntawee, Wirongrong Changpetch, Phairot Phromwat, Kacharin Raschasin, Phunyaphat Sarnkhaeveerakul, Pannawat Supapannachart, Wannapol Buthasane, Budhan S. Pukazhenthi, Klaus-Peter Koepfli, Prapat Suriyaphol, Sithichoke Tangphatsornruang, Gunnaporn Suriyaphol, Vorasuk Shotelersuk
Published 2023-11-01

The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis

by Timothy M Walker, DPhil, Paolo Miotto, PhD, Claudio U Köser, PhD, Philip W Fowler, PhD, Jeff Knaggs, BSc, Zamin Iqbal, DPhil, Martin Hunt, PhD, Leonid Chindelevitch, PhD, Maha R Farhat, MD, Daniela Maria Cirillo, PhD, Iñaki Comas, PhD, James Posey, PhD, Shaheed V Omar, PhD, Timothy EA Peto, ProfFRCP, Anita Suresh, MSc, Swapna Uplekar, PhD, Sacha Laurent, PhD, Rebecca E Colman, PhD, Carl-Michael Nathanson, PhD, Matteo Zignol, MD, Ann Sarah Walker, ProfPhD, Derrick W Crook, ProfFRCPath, Nazir Ismail, FRCPath [SA], Timothy C Rodwell, ProfMD, A Sarah Walker, Adrie J C Steyn, Ajit Lalvani, Alain Baulard, Alan Christoffels, Alberto Mendoza-Ticona, Alberto Trovato, Alena Skrahina, Alexander S Lachapelle, Alice Brankin, Amy Piatek, Ana Gibertoni Cruz, Anastasia Koch, Andrea Maurizio Cabibbe, Andrea Spitaleri, Angela P Brandao, Angkana Chaiprasert, Anita Suresh, Anna Barbova, Annelies Van Rie, Arash Ghodousi, Arnold Bainomugisa, Ayan Mandal, Aysha Roohi, Babak Javid, Baoli Zhu, Brice Letcher, Camilla Rodrigues, Camus Nimmo, Carl-Michael NATHANSON, Carla Duncan, Christopher Coulter, Christian Utpatel, Chunfa Liu, Clara Grazian, Clare Kong, Claudio U Köser, Daniel J Wilson, Daniela Maria Cirillo, Daniela Matias, Danielle Jorgensen, Danila Zimenkov, Darren Chetty, David AJ Moore, David A Clifton, Derrick W Crook, Dick van Soolingen, Dongxin Liu, Donna Kohlerschmidt, Draurio Barreira, Dumisani Ngcamu, Elias David Santos Lazaro, Ellis Kelly, Emanuele Borroni, Emma Roycroft, Emmanuel Andre, Erik C Böttger, Esther Robinson, Fabrizio Menardo, Flavia F Mendes, Frances B Jamieson, Francesc Coll, George Fu Gao, George W Kasule, Gian Maria Rossolini, Gillian Rodger, E Grace Smith, Graeme Meintjes, Guy Thwaites, Harald Hoffmann, Heidi Albert, Helen Cox, Ian F Laurenson, Iñaki Comas, Irena Arandjelovic, Ivan Barilar, Jaime Robledo, James Millard, James Johnston, Jamie Posey, Jason R Andrews, Jeff Knaggs, Jennifer Gardy, Jennifer Guthrie, Jill Taylor, Jim Werngren, John Metcalfe, Jorge Coronel, Joseph Shea, Joshua Carter, Juliana MW Pinhata, Julianne V Kus, Katharina Todt, Kathryn Holt, Kayzad S Nilgiriwala, Kelen T Ghisi, Kerri M Malone, Kiatichai Faksri, Kimberlee A Musser, Lavania Joseph, Leen Rigouts, Leonid Chindelevitch, Lisa Jarrett, Louis Grandjean, Lucilaine Ferrazoli, Mabel Rodrigues, Maha Farhat, Marco Schito, Margaret M Fitzgibbon, Marguerite Massinga Loembé, Maria Wijkander, Marie Ballif, Marie-Sylvianne Rabodoarivelo, Marina Mihalic, Mark WILCOX, Martin Hunt, Matteo ZIGNOL, Matthias Merker, Matthias Egger, Max O'Donnell, Maxine Caws, Mei-Hua Wu, Michael G Whitfield, Michael Inouye, Mikael Mansjö, Minh Ha Dang Thi, Moses Joloba, SM Mostofa Kamal, Nana Okozi, Nazir ISMAIL, Nerges Mistry, Nhung N Hoang, Niaina Rakotosamimanana, Nicholas I Paton, Paola M V Rancoita, Paolo Miotto, Pascal Lapierre, Patricia J Hall, Patrick Tang, Pauline Claxton, Penelope Wintringer, Peter M Keller, Phan Vuong Khac Thai, Philip W Fowler, Philip Supply, Prapaporn Srilohasin, Prapat Suriyaphol, Priti Rathod, Priti Kambli, Ramona Groenheit, Rebecca E Colman, Rick Twee-Hee Ong, Robin M Warren, Robert J Wilkinson, Roland Diel, Rosangela S Oliveira, Rukhsar Khot, Ruwen Jou, Sabira Tahseen, Sacha Laurent, Saheer Gharbia, Samaneh Kouchaki, Sanchi Shah, Sara Plesnik, Sarah G Earle, Sarah Dunstan, Sarah J Hoosdally, Satoshi Mitarai, Sebastien Gagneux, Shaheed V Omar, Shen-Yuan Yao, Simon Grandjean Lapierre, Simone Battaglia, Stefan Niemann, Sushil Pandey, Swapna Uplekar, Tanya A Halse, Ted Cohen, Teresa Cortes, Therdsak Prammananan, Thomas A Kohl, Nguyen T T Thuong, Tik Ying Teo, Timothy E A Peto, Timothy C Rodwell, Timothy William, Timothy M Walker, Thomas R Rogers, Utkarsha Surve, Vanessa Mathys, Victoria Furió, Victoria Cook, Srinivasan Vijay, Vincent Escuyer, Viola Dreyer, Vitali Sintchenko, Vonthanak Saphonn, Walter Solano, Wan-Hsuan Lin, Wayne van Gemert, Wencong He, Yang Yang, Yanlin Zhao, Youwen Qin, Yu-Xin Xiao, Zahra Hasan, Zamin Iqbal, Zully M Puyen
Published 2022-04-01

Genomic evidence supporting the clonal expansion of extensively drug resistant tuberculosis bacteria belonging to a rare Proto-Beijing genotype

by Prapaporn Srilohasin, Therdsak Prammananan, Kiatichai Faksri, Jody Phelan, Prapat Suriyaphol, Phalin Kamolwat, Saijai Smithtikarn, Areeya Disratthakit, Sanjib Regmi, Manoon Leechawengwongs, Rick Twee-Hee Ong, Yik-Ying Teo, Sissades Thongsima, Taane Clark, Angkana Chaiprasert
Published 2021