Population structure and genetic diversity of Streptococcus suis isolates obtained from the United States

by Tracy L. Nicholson, Anwar A. Kalalah, Anwar A. Kalalah, Mark Eppinger, Mark Eppinger
Published 2023-09-01

Pathogenomes and virulence profiles of representative big six non-O157 serogroup Shiga toxin-producing Escherichia coli

by Anwar A. Kalalah, Anwar A. Kalalah, Sara S. K. Koenig, Sara S. K. Koenig, James L. Bono, Joseph M. Bosilevac, Mark Eppinger, Mark Eppinger
Published 2024-03-01

Escherichia coli O157:H7 tir 255 T > A allele strains differ in chromosomal and plasmid composition

by Margaret D. Weinroth, Michael L. Clawson, Gregory P. Harhay, Mark Eppinger, Mark Eppinger, Dayna M. Harhay, Timothy P. L. Smith, James L. Bono
Published 2023-12-01

Genome Sequence Analysis and Characterization of Shiga Toxin 2 Production by Escherichia coli O157:H7 Strains Associated With a Laboratory Infection

by Mark Eppinger, Mark Eppinger, Sonia Almería, Anna Allué-Guardia, Lori K. Bagi, Anwar A. Kalalah, Anwar A. Kalalah, Joshua B. Gurtler, Pina M. Fratamico
Published 2022-06-01

Single Nucleotide Polymorphism Analysis Indicates Genetic Distinction and Reduced Diversity of Swine-Associated Methicillin Resistant Staphylococcus aureus (MRSA) ST5 Isolates Comp...

by Samantha J. Hau, Anna Allué-Guardia, Anna Allué-Guardia, Brigida Rusconi, Brigida Rusconi, Jisun S. Haan, Peter R. Davies, Timothy S. Frana, Mark Eppinger, Mark Eppinger, Tracy L. Nicholson
Published 2018-09-01

Identification of a mouse Lactobacillus johnsonii strain with deconjugase activity against the FXR antagonist T-β-MCA.

by Michael DiMarzio, Brigida Rusconi, Neela H Yennawar, Mark Eppinger, Andrew D Patterson, Edward G Dudley
Published 2017-01-01

Pathogenomes of Shiga Toxin Positive and Negative <i>Escherichia coli</i> O157:H7 Strains TT12A and TT12B: Comprehensive Phylogenomic Analysis Using Closed Genomes

by Anwar A. Kalalah, Sara S. K. Koenig, Peter Feng, Joseph M. Bosilevac, James L. Bono, Mark Eppinger
Published 2024-03-01

Novel plasmids and resistance phenotypes in Yersinia pestis: unique plasmid inventory of strain Java 9 mediates high levels of arsenic resistance.

by Mark Eppinger, Lyndsay Radnedge, Gary Andersen, Nicholas Vietri, Grant Severson, Sherry Mou, Jacques Ravel, Patricia L Worsham
Published 2012-01-01

Comparative Virulence and Genomic Analysis of Streptococcus suis Isolates

by Tracy L. Nicholson, Ursula Waack, Ursula Waack, Tavis K. Anderson, Darrell O. Bayles, Sam R. Zaia, Sam R. Zaia, Isaiah Goertz, Isaiah Goertz, Mark Eppinger, Mark Eppinger, Samantha J. Hau, Samantha J. Hau, Susan L. Brockmeier, Sarah M. Shore
Published 2021-01-01

Pathogenomes of Atypical Non-shigatoxigenic Escherichia coli NSF/SF O157:H7/NM: Comprehensive Phylogenomic Analysis Using Closed Genomes

by Emmanuel C. Nyong, Emmanuel C. Nyong, Sam R. Zaia, Sam R. Zaia, Anna Allué-Guardia, Anna Allué-Guardia, Armando L. Rodriguez, Zaina Irion-Byrd, Zaina Irion-Byrd, Sara S. K. Koenig, Sara S. K. Koenig, Peter Feng, James L. Bono, Mark Eppinger, Mark Eppinger
Published 2020-04-01

Genetic and Virulence Profiles of Enteroaggregative Escherichia coli (EAEC) Isolated From Deployed Military Personnel (DMP) With Travelers' Diarrhea

by Courtney D. Petro, Jeffrey K. Duncan, Yuliya I. Seldina, Anna Allué-Guardia, Anna Allué-Guardia, Mark Eppinger, Mark Eppinger, Mark S. Riddle, David R. Tribble, Ryan C. Johnson, Clifton L. Dalgard, Clifton L. Dalgard, Gauthaman Sukumar, Gauthaman Sukumar, Patrick Connor, Nadia Boisen, Angela R. Melton-Celsa
Published 2020-05-01

Who ate whom? Adaptive Helicobacter genomic changes that accompanied a host jump from early humans to large felines.

by Mark Eppinger, Claudia Baar, Bodo Linz, Günter Raddatz, Christa Lanz, Heike Keller, Giovanna Morelli, Helga Gressmann, Mark Achtman, Stephan C Schuster
Published 2006-07-01

Who ate whom? Adaptive Helicobacter genomic changes that accompanied a host jump from early humans to large felines.

by Mark Eppinger, Claudia Baar, Bodo Linz, Günter Raddatz, Christa Lanz, Heike Keller, Giovanna Morelli, Helga Gressmann, Mark Achtman, Stephan C Schuster
Published 2006-07-01

The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of Far East scarlet-like fever.

by Mark Eppinger, M J Rosovitz, Wolfgang Florian Fricke, David A Rasko, Galina Kokorina, Corinne Fayolle, Luther E Lindler, Elisabeth Carniel, Jacques Ravel
Published 2007-08-01

Pathogenome comparison and global phylogeny of Escherichia coli ST1485 strains

by Ahmed M. Hammad, Narjol Gonzalez-Escalona, Amira El Tahan, Nasser H. Abbas, Sara S.K. Koenig, Anna Allué-Guardia, Mark Eppinger, Maria Hoffmann
Published 2022-11-01

Yersinia pestis evolution on a small timescale: comparison of whole genome sequences from North America.

by Raymond K Auerbach, Apichai Tuanyok, William S Probert, Leo Kenefic, Amy J Vogler, David C Bruce, Christine Munk, Thomas S Brettin, Mark Eppinger, Jacques Ravel, David M Wagner, Paul Keim
Published 2007-08-01

Phylogenetic Diversity of <named-content content-type="genus-species">Vibrio cholerae</named-content> Associated with Endemic Cholera in Mexico from 1991 to 2008

by Seon Young Choi, Shah M. Rashed, Nur A. Hasan, Munirul Alam, Tarequl Islam, Abdus Sadique, Fatema-Tuz Johura, Mark Eppinger, Jacques Ravel, Anwar Huq, Alejandro Cravioto, Rita R. Colwell
Published 2016-05-01

<named-content content-type="genus-species">Acinetobacter baumannii</named-content> Gastrointestinal Colonization Is Facilitated by Secretory IgA Which Is Reductively Dissociated b...

by Patrick M. Ketter, Jieh-Juen Yu, M. Neal Guentzel, Holly C. May, Rishein Gupta, Mark Eppinger, Karl E. Klose, J. Seshu, James P. Chambers, Andrew P. Cap, Bernard P. Arulanandam
Published 2018-09-01

Phylogeography and molecular epidemiology of Yersinia pestis in Madagascar.

by Amy J Vogler, Fabien Chan, David M Wagner, Philippe Roumagnac, Judy Lee, Roxanne Nera, Mark Eppinger, Jacques Ravel, Lila Rahalison, Bruno W Rasoamanana, Stephen M Beckstrom-Sternberg, Mark Achtman, Suzanne Chanteau, Paul Keim
Published 2011-09-01

Genomic Epidemiology of the Haitian Cholera Outbreak: a Single Introduction Followed by Rapid, Extensive, and Continued Spread Characterized the Onset of the Epidemic

by Mark Eppinger, Talima Pearson, Sara S. K. Koenig, Ofori Pearson, Nathan Hicks, Sonia Agrawal, Fatemeh Sanjar, Kevin Galens, Sean Daugherty, Jonathan Crabtree, Rene S. Hendriksen, Lance B. Price, Bishnu P. Upadhyay, Geeta Shakya, Claire M. Fraser, Jacques Ravel, Paul S. Keim
Published 2014-12-01