SNPFile – A software library and file format for large scale association mapping and population genetics studies

by Nielsen Jesper, Mailund Thomas
Published 2008-12-01

Whole genome association mapping by incompatibilities and local perfect phylogenies

by Besenbacher Søren, Mailund Thomas, Schierup Mikkel H
Published 2006-10-01

A fast algorithm for genome-wide haplotype pattern mining

by Pedersen Christian NS, Besenbacher Søren, Mailund Thomas
Published 2009-01-01

Investigating selection on viruses: a statistical alignment approach

by Lunter Gerton, Mailund Thomas, de Groot Saskia, Hein Jotun
Published 2008-07-01

A sub-cubic time algorithm for computing the quartet distance between two general trees

by Mailund Thomas, Kristensen Anders K, Nielsen Jesper, Pedersen Christian NS
Published 2011-06-01

Fast calculation of the quartet distance between trees of arbitrary degrees

by Pedersen Christian NS, Mailund Thomas, Christiansen Chris, Randers Martin, Stissing Martin
Published 2006-09-01

Recrafting the neighbor-joining method

by Pedersen Christian NS, Fagerberg Rolf, Brodal Gerth S, Mailund Thomas, Phillips Derek
Published 2006-01-01

CoaSim: A flexible environment for simulating genetic data under coalescent models

by Pedersen Christian NS, Schierup Mikkel H, Mailund Thomas, Mechlenborg Peter JM, Madsen Jesper N, Schauser Leif
Published 2005-10-01

Haplotype frequencies in a sub-region of chromosome 19q13.3, related to risk and prognosis of cancer, differ dramatically between ethnic groups

by Wang Jun, Li Heng, Mailund Thomas, Schierup Mikkel H, Tjønneland Anne, Vogel Ulla, Bolund Lars, Nexø Bjørn A
Published 2009-03-01

Pigs in sequence space: A 0.66X coverage pig genome survey based on shotgun sequencing

by Li Wei, Dong Wei, Hu Songnian, Liu Bin, Wang Jun, Klein Ami, Hornshøj Henrik, Mailund Thomas, Christensen Ole F, Stærfeldt Hans-Henrik, Panitz Frank, Gorodkin Jan, Jørgensen Frank G, Schierup Mikkel H, Wernersson Rasmus, Wong Gane KS, Yu Jun, Wang Jian, Bendixen Christian, Fredholm Merete, Brunak Søren, Yang Huanming, Bolund Lars
Published 2005-05-01

Ohana, a tool set for population genetic analyses of admixture components

by Cheng, Jade Yu, Mailund, Thomas, Nielsen, Rasmus
Published 2016

The influence of relatives on the efficiency and error rate of familial searching.

by Rohlfs, Rori V, Murphy, Erin, Song, Yun S, Slatkin, Montgomery
Published 2013

Great ape genetic diversity and population history

by Prado-Martinez, Javier, Sudmant, Peter H., Kidd, Jeffrey M., Li, Heng, Kelley, Joanna L., Lorente-Galdos, Belen, Veeramah, Krishna R., Woerner, August E., O’Connor, Timothy D., Santpere, Gabriel, Cagan, Alexander, Theunert, Christoph, Casals, Ferran, Laayouni, Hafid, Munch, Kasper, Hobolth, Asger, Halager, Anders E., Malig, Maika, Hernandez-Rodriguez, Jessica, Hernando-Herraez, Irene, Prüfer, Kay, Pybus, Marc, Johnstone, Laurel, Lachmann, Michael, Alkan, Can, Twigg, Dorina, Petit, Natalia, Baker, Carl, Hormozdiari, Fereydoun, Fernandez-Callejo, Marcos, Dabad, Marc, Wilson, Michael L., Stevison, Laurie, Camprubí, Cristina, Carvalho, Tiago, Ruiz-Herrera, Aurora, Vives, Laura, Mele, Marta, Abello, Teresa, Kondova, Ivanela, Bontrop, Ronald E., Pusey, Anne, Lankester, Felix, Kiyang, John A., Bergl, Richard A., Lonsdorf, Elizabeth, Myers, Simon, Ventura, Mario, Gagneux, Pascal, Comas, David, Siegismund, Hans, Blanc, Julie, Agueda-Calpena, Lidia, Gut, Marta, Fulton, Lucinda, Tishkoff, Sarah A., Mullikin, James C., Wilson, Richard K., Gut, Ivo G., Gonder, Mary Katherine, Ryder, Oliver A., Hahn, Beatrice H., Navarro, Arcadi, Akey, Joshua M., Bertranpetit, Jaume, Reich, David, Mailund, Thomas, Schierup, Mikkel H., Hvilsom, Christina, Andrés, Aida M., Wall, Jeffrey D., Bustamante, Carlos D., Hammer, Michael F., Eichler, Evan E., Marques-Bonet, Tomas
Published 2014

Fast admixture analysis and population tree estimation for SNP and NGS data.

by Cheng, Jade Yu, Mailund, Thomas, Nielsen, Rasmus
Published 2017

Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing.

by Bataillon, Thomas, Duan, Jinjie, Hvilsom, Christina, Jin, Xin, Li, Yingrui, Skov, Laurits, Glemin, Sylvain, Munch, Kasper, Jiang, Tao, Qian, Yu, Hobolth, Asger, Wang, Jun, Wang, Jun, Mailund, Thomas, Siegismund, Hans R, Schierup, Mikkel H
Published 2015

A genomic history of Aboriginal Australia.

by Malaspinas, Anna-Sapfo, Westaway, Michael C, Muller, Craig, Sousa, Vitor C, Lao, Oscar, Alves, Isabel, Bergström, Anders, Athanasiadis, Georgios, Cheng, Jade Y, Crawford, Jacob E, Heupink, Tim H, Macholdt, Enrico, Peischl, Stephan, Rasmussen, Simon, Schiffels, Stephan, Subramanian, Sankar, Wright, Joanne L, Albrechtsen, Anders, Barbieri, Chiara, Dupanloup, Isabelle, Eriksson, Anders, Margaryan, Ashot, Moltke, Ida, Pugach, Irina, Korneliussen, Thorfinn S, Levkivskyi, Ivan P, Moreno-Mayar, J Víctor, Ni, Shengyu, Racimo, Fernando, Sikora, Martin, Xue, Yali, Aghakhanian, Farhang A, Brucato, Nicolas, Brunak, Søren, Campos, Paula F, Clark, Warren, Ellingvåg, Sturla, Fourmile, Gudjugudju, Gerbault, Pascale, Injie, Darren, Koki, George, Leavesley, Matthew, Logan, Betty, Lynch, Aubrey, Matisoo-Smith, Elizabeth A, McAllister, Peter J, Mentzer, Alexander J, Metspalu, Mait, Migliano, Andrea B, Murgha, Les, Phipps, Maude E, Pomat, William, Reynolds, Doc, Ricaut, Francois-Xavier, Siba, Peter, Thomas, Mark G, Wales, Thomas, Wall, Colleen Ma'run, Oppenheimer, Stephen J, Tyler-Smith, Chris, Durbin, Richard, Dortch, Joe, Manica, Andrea, Schierup, Mikkel H, Foley, Robert A, Lahr, Marta Mirazón, Bowern, Claire, Wall, Jeffrey D, Mailund, Thomas, Stoneking, Mark, Nielsen, Rasmus, Sandhu, Manjinder S, Excoffier, Laurent, Lambert, David M, Willerslev, Eske
Published 2018

Insights into hominid evolution from the gorilla genome sequence.

by Scally, Aylwyn, Dutheil, Julien Y, Hillier, LaDeana W, Jordan, Gregory E, Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H, Schwalie, Petra C, Tang, Y Amy, Ward, Michelle C, Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N, Ayub, Qasim, Ball, Edward V, Beal, Kathryn, Bradley, Brenda J, Chen, Yuan, Clee, Chris M, Fitzgerald, Stephen, Graves, Tina A, Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K, Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C, Munch, Kasper, O'Connor, Timothy D, Phillips, Andrew D, Prado-Martinez, Javier, Rogers, Anthony S, Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T, Stenson, Peter D, Turner, Daniel J, Vigilant, Linda, Vilella, Albert J, Whitener, Weldon, Zhu, Baoli, Cooper, David N, de Jong, Pieter, Dermitzakis, Emmanouil T, Eichler, Evan E, Flicek, Paul, Goldman, Nick, Mundy, Nicholas I, Ning, Zemin, Odom, Duncan T, Ponting, Chris P, Quail, Michael A, Ryder, Oliver A, Searle, Stephen M, Warren, Wesley C, Wilson, Richard K, Schierup, Mikkel H, Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard
Published 2020