A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms

by Deal Karin R, Ma Yaqin, Xu Kenong, Luo Ming-Cheng, Nicolet Charles M, Dvorak Jan
Published 2009-01-01

A new implementation of high-throughput five-dimensional clone pooling strategy for BAC library screening

by Deal Karin R, Xu Kenong, Luo Ming-Cheng, You Frank M, Anderson Olin D, Dvorak Jan
Published 2010-12-01

BatchPrimer3: A high throughput web application for PCR and sequencing primer design

by Ma Yaqin, Luo Ming-cheng, Gu Yong, Huo Naxin, You Frank M, Hane Dave, Lazo Gerard R, Dvorak Jan, Anderson Olin D
Published 2008-05-01

Annotation-based genome-wide SNP discovery in the large and complex <it>Aegilops tauschii </it>genome using next-generation sequencing without a reference genome sequence

by Luo Ming-Cheng, Gu Yong Q, Deal Karin R, Huo Naxin, You Frank M, McGuire Patrick E, Dvorak Jan, Anderson Olin D
Published 2011-01-01

Physical mapping of a large plant genome using global high-information-content-fingerprinting: the distal region of the wheat ancestor <it>Aegilops tauschii </it>chromosome 3DS

by You Frank M, Anderson Olin D, Gill Bikram S, Ramsay Luke, Dvorak Jan, Luo Ming-Cheng, Fleury Delphine, Shoaei Zahra, Deal Karin R, Langridge Peter
Published 2010-06-01

A first generation BAC-based physical map of the rainbow trout genome

by Thorgaard Gary H, Vallejo Roger L, You Frank M, Genet Carine, Hu Yuqin, Luo Ming-Cheng, Palti Yniv, Wheeler Paul A, Rexroad Caird E
Published 2009-10-01

Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species

by Doležel Jaroslav, Šafář Jan, Šimková Hana, Kopecký David, Anderson Olin D, You Frank M, Ma Yaqin, Luo Ming-Cheng, Gill Bikram, McGuire Patrick E, Dvorak Jan
Published 2010-02-01

Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms

by You Frank M, Deal Karin R, Wang Jirui, Britton Monica T, Fass Joseph N, Lin Dawei, Dandekar Abhaya M, Leslie Charles A, Aradhya Mallikarjuna, Luo Ming-Cheng, Dvorak Jan
Published 2012-07-01

A first generation integrated map of the rainbow trout genome

by Tabet-Canale Kamila, Castaño-Sánchez Cecilia, Hu Yuqin, Gao Guangtu, Charlet Aurélie, Luo Ming-Cheng, Genet Carine, Palti Yniv, Krieg Francine, Yao Jianbo, Vallejo Roger L, Rexroad Caird E
Published 2011-04-01

A BAC-based physical map of <it>Brachypodium distachyon </it>and its comparative analysis with rice and wheat

by Nelson William M, Lazo Gerard R, You Frank M, Vogel John P, Huo Naxin, Ma Yaqin, Gu Yong Q, Soderlund Carol, Dvorak Jan, Anderson Olin D, Luo Ming-Cheng
Published 2009-10-01

A physical map of the papaya genome with integrated genetic map and genome sequence

by Luo Ming-Cheng, Acob Ricelle A, Guan Peizhu, Hou Shaobin, Murray Jan E, Jones Meghan R, Bowers John E, Skelton Rachel L, Tong Eric, Yu Qingyi, Moore Paul H, Alam Maqsudul, Paterson Andrew H, Ming Ray
Published 2009-08-01

Physical mapping resources for large plant genomes: radiation hybrids for wheat D-genome progenitor <it>Aegilops tauschii</it>

by Kumar Ajay, Simons Kristin, Iqbal Muhammad J, de Jiménez Monika, Bassi Filippo M, Ghavami Farhad, Al-Azzam Omar, Drader Thomas, Wang Yi, Luo Ming-Cheng, Gu Yong Q, Denton Anne, Lazo Gerard R, Xu Steven S, Dvorak Jan, Kianian Penny MA, Kianian Shahryar F
Published 2012-11-01

Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (<it>Triticum aestivum </it>L.)

by Campbell Kim, Chen Jianli, Glover Karl, Dreisigacker Susanne, Anderson James A, Talbert Luther E, Clark Dale R, Matnyazov Rustam, Baenziger Stephen P, Luo Ming-Cheng, Dvorak Jan, Dubcovsky Jorge, Chao Shiaoman, Bruckner Phil L, Rudd Jackie C, Haley Scott, Carver Brett F, Perry Sid, Sorrells Mark E, Akhunov Eduard D
Published 2010-12-01

Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes

by McGuire Patrick E, Matthews David E, Ma Yaqin Q, Luo Ming-Cheng, Lazo Gerard R, Huo Naxin, Heo Hwayoung, Hadam Jakub, Gu Yong Q, Gill Bikram S, Dubcovsky Jorge, Deal Karin R, Crossman Curt C, Conley Emily J, Coleman-Derr Devin, Clegg Michael T, Blake Nancy, Anderson James A, Anderson Olin D, Akhunova Alina R, Akhunov Eduard D, Morrell Peter L, Qualset Calvin O, Renfro James, Tabanao Dindo, Talbert Luther E, Tian Chao, Toleno Donna M, Warburton Marilyn L, You Frank M, Zhang Wenjun, Dvorak Jan
Published 2010-12-01

Wheat Ms2 encodes for an orphan protein that confers male sterility in grass species.

by Ni, Fei, Qi, Juan, Hao, Qunqun, Lyu, Bo, Luo, Ming-Cheng, Wang, Yan, Chen, Fengjuan, Wang, Shuyun, Zhang, Chaozhong, Epstein, Lynn, Zhao, Xiangyu, Wang, Honggang, Zhang, Xiansheng, Chen, Cuixia, Sun, Lanzhen, Fu, Daolin
Published 2017

SNP-revealed genetic diversity in wild emmer wheat correlates with ecological factors

by Ren, Jing, Chen, Liang, Sun, Daokun, You, Frank M, Wang, Jirui, Peng, Yunliang, Nevo, Eviatar, Beiles, Avigdor, Sun, Dongfa, Luo, Ming-Cheng, Peng, Junhua
Published 2013

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

by Varshney, Rajeev, Song, Chi, Saxena, Rachit, Azam, Sarwar, Yu, Sheng, Sharpe, Andrew, Cannon, Steven, Baek, Jong, Rosen, Benjamin, Tar'an, Bunyamin, Millan, Teresa, Zhang, Xudong, Ramsay, Larissa, Iwata, Aiko, Wang, Ying, Nelson, William, Farmer, Andrew, Gaur, Pooran, Soderlund, Carol, Penmetsa, R, Xu, Chunyan, Bharti, Arvind, He, Weiming, Winter, Peter, Zhao, Shancen, Hane, James, Carrasquilla-Garcia, Noelia, Condie, Janet, Upadhyaya, Hari, Luo, Ming-Cheng, Thudi, Mahendar, Gowda, C, Singh, Narendra, Lichtenzveig, Judith, Gali, Krishna, Rubio, Josefa, Nadarajan, N, Dolezel, Jaroslav, Bansal, Kailash, Xu, Xun, Edwards, David, Zhang, Gengyun, Kahl, Guenter, Gil, Juan, Singh, Karam, Datta, Swapan, Jackson, Scott, Wang, Jun, Cook, Douglas
Published 2013

An ancestral NB-LRR with duplicated 3'UTRs confers stripe rust resistance in wheat and barley.

by Zhang, Chaozhong, Huang, Lin, Zhang, Huifei, Hao, Qunqun, Lyu, Bo, Wang, Meinan, Epstein, Lynn, Liu, Miao, Kou, Chunlan, Qi, Juan, Chen, Fengjuan, Li, Mengkai, Gao, Ge, Ni, Fei, Zhang, Lianquan, Hao, Ming, Wang, Jirui, Chen, Xianming, Luo, Ming-Cheng, Zheng, Youliang, Wu, Jiajie, Liu, Dengcai, Fu, Daolin
Published 2019

Sequencing a Juglans regia × J. microcarpa hybrid yields high-quality genome assemblies of parental species.

by Zhu, Tingting, Wang, Le, You, Frank M, Rodriguez, Juan C, Deal, Karin R, Chen, Limin, Li, Jie, Chakraborty, Sandeep, Balan, Bipin, Jiang, Cai-Zhong, Brown, Patrick J, Leslie, Charles A, Aradhya, Mallikarjuna K, Dandekar, Abhaya M, McGuire, Patrick E, Kluepfel, Daniel, Dvorak, Jan, Luo, Ming-Cheng
Published 2019

Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat

by Huo, Naxin, Vogel, John P., Lazo, Gerard R., You, Frank M., Ma, Yaqin, McMahon, Stephanie, Dvorak, Jan, Anderson, Olin D., Luo, Ming-Cheng, Gu, Yong Q.
Published 2009