BoostMe accurately predicts DNA methylation values in whole-genome bisulfite sequencing of multiple human tissues

by Luli S. Zou, Michael R. Erdos, D. Leland Taylor, Peter S. Chines, Arushi Varshney, The McDonnell Genome Institute, Stephen C. J. Parker, Francis S. Collins, John P. Didion
Published 2018-05-01

Single-cell ATAC-Seq in human pancreatic islets and deep learning upscaling of rare cells reveals cell-specific type 2 diabetes regulatory signatures

by Vivek Rai, Daniel X. Quang, Michael R. Erdos, Darren A. Cusanovich, Riza M. Daza, Narisu Narisu, Luli S. Zou, John P. Didion, Yuanfang Guan, Jay Shendure, Stephen C.J. Parker, Francis S. Collins
Published 2020-02-01

Augmenting and Directing Robust, Long-Range CRISPR-Mediated Activation in Human Cells

by Tak, Y. Esther, Horng, Joy E., Perry, Nicholas T., Schultz, Hayley, Iyer, Sowmya, Yao, Qiuming, Zou, Luli S., Aryee, Martin, Pinello, Luca, Joung, Keith
Published 2022

Robust decomposition of cell type mixtures in spatial transcriptomics

by Cable, Dylan, Murray, Evan, Zou, Luli, Goeva, Aleksandrina, Macosko, Evan, Chen, Fei, Irizarry, Rafael
Published 2022