Systematic evaluation of supervised machine learning for sample origin prediction using metagenomic sequencing data

by Julie Chih-yu Chen, Andrea D. Tyler
Published 2020-12-01

Human Papillomavirus 16 E6 and E7 Oncoproteins Alter the Abundance of Proteins Associated with DNA Damage Response, Immune Signaling and Epidermal Differentiation

by Kerry Dust, Michael Carpenter, Julie Chih-yu Chen, Chris Grant, Stuart McCorrister, Garret R. Westmacott, Alberto Severini
Published 2022-08-01

Validation and Establishment of the SARS-CoV-2 Lentivirus Surrogate Neutralization Assay as a Prescreening Tool for the Plaque Reduction Neutralization Test

by John Merluza, Johnny Ung, Kai Makowski, Alyssia Robinson, Kathy Manguiat, Nicole Mueller, Jonathan Audet, Julie Chih-Yu Chen, James E. Strong, Heidi Wood, Alexander Bello
Published 2023-02-01

Clinical Metagenomics Is Increasingly Accurate and Affordable to Detect Enteric Bacterial Pathogens in Stool

by Christy-Lynn Peterson, David Alexander, Julie Chih-Yu Chen, Heather Adam, Matthew Walker, Jennifer Ali, Jessica Forbes, Eduardo Taboada, Dillon O. R. Barker, Morag Graham, Natalie Knox, Aleisha R. Reimer
Published 2022-02-01