Identification and characterization of putative Aeromonas spp. T3SS effectors.

by Luiz Thiberio Rangel, Jeremiah Marden, Sophie Colston, João Carlos Setubal, Joerg Graf, Johann Peter Gogarten
Published 2019-01-01

Genetic Resources for Advanced Biofuel Production Described with the Gene Ontology

by Trudy eTorto-Alalibo, Trudy eTorto-Alalibo, Endang ePurwantini, Endang ePurwantini, Jane eLomax, Joao Carlos Setubal, Joao Carlos Setubal, Biswarup eMukhopadhyay, Biswarup eMukhopadhyay, Biswarup eMukhopadhyay, Brett Merrick Tyler, Brett Merrick Tyler
Published 2014-10-01

Oxygen-induced pathological angiogenesis promotes intense lipid synthesis and remodeling in the retina

by Alex Inague, Lilian Costa Alecrim, Jhonatas Sirino Monteiro, Marcos Yukio Yoshinaga, João Carlos Setubal, Sayuri Miyamoto, Ricardo José Giordano
Published 2023-06-01

Characterization of metagenome-assembled genomes from the International Space Station

by Nitin K. Singh, Jason M. Wood, Jose Patane, Livia Maria Silva Moura, Jonathan Lombardino, João Carlos Setubal, Kasthuri Venkateswaran
Published 2023-06-01

Anti-Trypanosoma cruzi antibody profiling in patients with Chagas disease treated with benznidazole assessed by genome phage display.

by Luis Antonio Rodriguez Carnero, Andréia Kuramoto, Léa Campos de Oliveira, Jhonatas Sirino Monteiro, João Carlos Setubal, Edécio Cunha-Neto, Ester Cerdeira Sabino, Ricardo José Giordano
Published 2023-01-01

Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium

by Vinicius S. Flores, Deyvid E. Amgarten, Bruno Koshin Vázquez Iha, Krista A. Ryon, David Danko, Braden T. Tierney, Christopher Mason, Aline Maria da Silva, João Carlos Setubal
Published 2024-04-01

Publisher Correction: Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium

by Vinicius S. Flores, Deyvid E. Amgarten, Bruno Koshin Vázquez Iha, Krista A. Ryon, David Danko, Braden T. Tierney, Christopher Mason, Aline Maria da Silva, João Carlos Setubal
Published 2024-05-01

Isolation and characterization of vB_XciM_LucasX, a new jumbo phage that infects Xanthomonas citri and Xanthomonas fuscans.

by Vinícius Marquioni, Fernando Pacheco Nobre Rossi, Deborah Cezar Mendonça, Layla Farage Martins, Franklin Behlau, João Carlos Setubal, Aline Maria da Silva, Maria Teresa Marques Novo-Mansur
Published 2022-01-01

Isolation and characterization of vB_XciM_LucasX, a new jumbo phage that infects Xanthomonas citri and Xanthomonas fuscans

by Vinícius Marquioni, Fernando Pacheco Nobre Rossi, Deborah Cezar Mendonça, Layla Farage Martins, Franklin Behlau, João Carlos Setubal, Aline Maria da Silva, Maria Teresa Marques Novo-Mansur
Published 2022-01-01

Plasmid-mediated mcr-1 in carbapenem-susceptible Escherichia coli ST156 causing a blood infection: an unnoticeable spread of colistin resistance in Brazil?

by Flavia Rossi, Raquel Girardello, Carlos Morais, Ana Paula Cury, Layla Farage Martins, Aline Maria da Silva, Edson Abdala, João Carlos Setubal, Alberto José da Silva Duarte

Assessing the efficacy of eDNA metabarcoding for measuring microbial biodiversity within forest ecosystems

by Zachary S. Ladin, Barbra Ferrell, Jacob T. Dums, Ryan M. Moore, Delphis F. Levia, W. Gregory Shriver, Vincent D’Amico, Tara L. E. Trammell, João Carlos Setubal, K. Eric Wommack
Published 2021-01-01

Genome-resolved metagenome and metatranscriptome analyses of thermophilic composting reveal key bacterial players and their metabolic interactions

by Lucas Palma Perez Braga, Roberta Verciano Pereira, Layla Farage Martins, Livia Maria Silva Moura, Fabio Beltrame Sanchez, José Salvatore Leister Patané, Aline Maria da Silva, João Carlos Setubal
Published 2021-09-01

Tissue-associated bacterial alterations in rectal carcinoma patients revealed by 16S rRNA community profiling

by Andrew Maltez Thomas, Andrew Maltez Thomas, Andrew Maltez Thomas, Eliane Camargo de Jesus, Eliane Camargo de Jesus, Ademar Lopes, Samuel Aguiar Junior, Maria Dirlei Begnami, Rafael Malagoli Rocha, Paola Avelar Carpinetti, Anamaria Aranha Camargo, Christian Hoffmann, Helano Carioca Freitas, Helano Carioca Freitas, Israel Tojal da Silva, Diana Noronha Nunes, Joao Carlos Setubal, Joao Carlos Setubal, Emmanuel Dias-Neto, Emmanuel Dias-Neto
Published 2016-12-01

Global Distribution and Evolution of Mycobacterium bovis Lineages

by Cristina Kraemer Zimpel, Cristina Kraemer Zimpel, José Salvatore L. Patané, José Salvatore L. Patané, Aureliano Coelho Proença Guedes, Robson F. de Souza, Taiana T. Silva-Pereira, Taiana T. Silva-Pereira, Naila C. Soler Camargo, Naila C. Soler Camargo, Antônio F. de Souza Filho, Cássia Y. Ikuta, José Soares Ferreira Neto, João Carlos Setubal, João Carlos Setubal, Marcos Bryan Heinemann, Ana Marcia Sa Guimaraes
Published 2020-05-01

Protocol for design, construction, and selection of genome phage (gPhage) display libraries

by Luis Antonio Rodriguez Carnero, André Azevedo Reis Teixeira, Fenny Hui Fen Tang, Andréia Kuramoto, Maria Júlia Manso Alves, Walter Colli, João Carlos Setubal, Edécio Cunha-Neto, Renata Pasqualini, Wadih Arap, Ricardo José Giordano
Published 2021-12-01

Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages

by Deyvid Amgarten, Layla Farage Martins, Karen Cristina Lombardi, Luciana Principal Antunes, Ana Paula Silva de Souza, Gianlucca Gonçalves Nicastro, Elliott Watanabe Kitajima, Ronaldo Bento Quaggio, Chris Upton, João Carlos Setubal, Aline Maria da Silva
Published 2017-05-01

Competing Endogenous RNA in Colorectal Cancer: An Analysis for Colon, Rectum, and Rectosigmoid Junction

by Lucas Maciel Vieira, Lucas Maciel Vieira, Natasha Andressa Nogueira Jorge, João Batista de Sousa, João Carlos Setubal, Peter F. Stadler, Peter F. Stadler, Peter F. Stadler, Peter F. Stadler, Peter F. Stadler, Maria Emília Machado Telles Walter
Published 2021-06-01

Transcriptional signatures underlying dynamic phenotypic switching and novel disease biomarkers in a linear cellular model of melanoma progression

by Diogo de Oliveira Pessoa, Flávia Eichemberger Rius, Debora D'Angelo Papaiz, Ana Luísa Pedroso Ayub, Alice Santana Morais, Camila Ferreira de Souza, Vinicius Ferreira da Paixão, João Carlos Setubal, Julia Newton-Bishop, Jérémie Nsengimana, Hatylas Azevedo, Eduardo Moraes Reis, Miriam Galvonas Jasiulionis
Published 2021-04-01

Analysis of biliary MICRObiota in hepatoBILIOpancreatic diseases compared to healthy people [MICROBILIO]: Study protocol.

by Fernanda Sayuri do Nascimento, Milena Oliveira Suzuki, João Victor Taba, Vitoria Carneiro de Mattos, Leonardo Zumerkorn Pipek, Eugênia Machado Carneiro D'Albuquerque, Leandro Iuamoto, Alberto Meyer, Wellington Andraus, João Renato Rebello Pinho, Eduardo Guimarães Hourneaux de Moura, João Carlos Setubal, Luiz Augusto Carneiro-D'Albuquerque
Published 2020-01-01

Genomic Characterization of mcr-1.1-Producing Escherichia coli Recovered From Human Infections in São Paulo, Brazil

by Raquel Girardello, Carlos Morais Piroupo, Joaquim Martins, Marcia Helena Maffucci, Ana Paula Cury, Maria Renata Gomes Franco, Fernanda de Mello Malta, Natália Conceição Rocha, Natália Conceição Rocha, João Renato Rebello Pinho, João Renato Rebello Pinho, Flavia Rossi, Alberto José da Silva Duarte, João Carlos Setubal
Published 2021-06-01