A comparison of ImageJ and machine learning based image analysis methods to measure cassava bacterial blight disease severity

by Kiona Elliott, Jeffrey C. Berry, Hobin Kim, Rebecca S. Bart
Published 2022-06-01

An automated, high-throughput method for standardizing image color profiles to improve image-based plant phenotyping

by Jeffrey C. Berry, Noah Fahlgren, Alexandria A. Pokorny, Rebecca S. Bart, Kira M. Veley
Published 2018-10-01

Escalation in the host-pathogen arms race: A host resistance response corresponds to a heightened bacterial virulence response.

by Qi Wang, Nadia Shakoor, Adam Boyher, Kira M Veley, Jeffrey C Berry, Todd C Mockler, Rebecca S Bart
Published 2021-01-01

Heat stress changes mineral nutrient concentrations in Chenopodium quinoa seed

by Jose C. Tovar, Jeffrey C. Berry, Carlos Quillatupa, S. Elizabeth Castillo, Lucia Acosta‐Gamboa, Noah Fahlgren, Malia A. Gehan
Published 2022-02-01

Increased signal-to-noise ratios within experimental field trials by regressing spatially distributed soil properties as principal components

by Jeffrey C Berry, Mingsheng Qi, Balasaheb V Sonawane, Amy Sheflin, Asaph Cousins, Jessica Prenni, Daniel P Schachtman, Peng Liu, Rebecca S Bart
Published 2022-07-01

Genomics-enabled analysis of the emergent disease cotton bacterial blight.

by Anne Z Phillips, Jeffrey C Berry, Mark C Wilson, Anupama Vijayaraghavan, Jillian Burke, J Imani Bunn, Tom W Allen, Terry Wheeler, Rebecca S Bart
Published 2017-09-01

Improving cassava bacterial blight resistance by editing the epigenome

by Kira M. Veley, Kiona Elliott, Greg Jensen, Zhenhui Zhong, Suhua Feng, Marisa Yoder, Kerrigan B. Gilbert, Jeffrey C. Berry, Zuh-Jyh Daniel Lin, Basudev Ghoshal, Javier Gallego-Bartolomé, Joanna Norton, Sharon Motomura-Wages, James C. Carrington, Steven E. Jacobsen, Rebecca S. Bart
Published 2023-01-01

PlantCV v2: Image analysis software for high-throughput plant phenotyping

by Malia A. Gehan, Noah Fahlgren, Arash Abbasi, Jeffrey C. Berry, Steven T. Callen, Leonardo Chavez, Andrew N. Doust, Max J. Feldman, Kerrigan B. Gilbert, John G. Hodge, J. Steen Hoyer, Andy Lin, Suxing Liu, César Lizárraga, Argelia Lorence, Michael Miller, Eric Platon, Monica Tessman, Tony Sax
Published 2017-12-01

Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii

by Ningning Zhang, Erin M. Mattoon, Will McHargue, Benedikt Venn, David Zimmer, Kresti Pecani, Jooyeon Jeong, Cheyenne M. Anderson, Chen Chen, Jeffrey C. Berry, Ming Xia, Shin-Cheng Tzeng, Eric Becker, Leila Pazouki, Bradley Evans, Fred Cross, Jianlin Cheng, Kirk J. Czymmek, Michael Schroda, Timo Mühlhaus, Ru Zhang
Published 2022-05-01