Management of a human immunodeficiency virus case with discordant antiviral drug resistance profiles in cerebrospinal fluid compared with plasma: a case report

by Didi Bang, Jannik Fonager, Isik Somuncu Johansen
Published 2022-02-01

Emergence of the G118R Pan-Integrase Resistance Mutation as a Result of Low Compliance to a Dolutegravir-Based cART

by Helene Mens, Lasse Fjordside, Jannik Fonager, Jan Gerstoft
Published 2022-06-01

Norovirus Epidemiology in Community and Health Care Settings and Association with Patient Age, Denmark

by Kristina T. Franck, Jannik Fonager, Annette K. Ersbøll, Blenda Böttiger
Published 2014-07-01

Rapid changes in transcription profiles of the Plasmodium yoelii yir multigene family in clonal populations: lack of epigenetic memory?

by Deirdre Cunningham, Jannik Fonager, William Jarra, Celine Carret, Peter Preiser, Jean Langhorne
Published 2009-01-01

Sequestration and tissue accumulation of human malaria parasites: can we learn anything from rodent models of malaria?

by Blandine Franke-Fayard, Jannik Fonager, Anneke Braks, Shahid M Khan, Chris J Janse
Published 2010-09-01

Improvements in metagenomic virus detection by simple pretreatment methods

by Anna S. Fomsgaard, Morten Rasmussen, Katja Spiess, Anders Fomsgaard, Graham J. Belsham, Jannik Fonager
Published 2022-11-01

Unbiased Virus Detection in a Danish Zoo Using a Portable Metagenomic Sequencing System

by Anna S. Fomsgaard, Stamatios A. Tahas, Katja Spiess, Charlotta Polacek, Jannik Fonager, Graham J. Belsham
Published 2023-06-01

Sequence analysis of the capsid gene during a genotype II.4 dominated norovirus season in one university hospital: identification of possible transmission routes.

by Barbara Juliane Holzknecht, Kristina Træholt Franck, Rikke Thoft Nielsen, Blenda Böttiger, Thea Kølsen Fischer, Jannik Fonager
Published 2015-01-01

A universal primer-independent next-generation sequencing approach for investigations of norovirus outbreaks and novel variants

by Jannik Fonager, Marc Stegger, Lasse Dam Rasmussen, Mille Weismann Poulsen, Jesper Rønn, Paal Skytt Andersen, Thea Kølsen Fischer
Published 2017-04-01

Possible Involvement of Central Nervous System in COVID-19 and Sequence Variability of SARS-CoV-2 Revealed in Autopsy Tissue Samples: A Case Report

by Lis Høy Marbjerg, Christina Jacobsen, Jannik Fonager, Claus Bøgelund, Morten Rasmussen, Anders Fomsgaard, Jytte Banner, Veronika Vorobieva Solholm Jensen
Published 2021-03-01

The application of new molecular methods in the investigation of a waterborne outbreak of norovirus in Denmark, 2012.

by Lieke B van Alphen, Frédérique Dorléans, Anna Charlotte Schultz, Jannik Fonager, Steen Ethelberg, Camilla Dalgaard, Marianne Adelhardt, Jørgen H Engberg, Thea Kølsen Fischer, Sofie Gillesberg Lassen
Published 2014-01-01

Effect of vaccination on household transmission of SARS-CoV-2 Delta variant of concern

by Frederik Plesner Lyngse, Kåre Mølbak, Matt Denwood, Lasse Engbo Christiansen, Camilla Holten Møller, Morten Rasmussen, Arieh Sierra Cohen, Marc Stegger, Jannik Fonager, Raphael Niklaus Sieber, Kirsten Maren Ellegaard, Claus Nielsen, Carsten Thure Kirkeby
Published 2022-06-01

Infection, recovery and re-infection of farmed mink with SARS-CoV-2.

by Thomas Bruun Rasmussen, Jannik Fonager, Charlotte Sværke Jørgensen, Ria Lassaunière, Anne Sofie Hammer, Michelle Lauge Quaade, Anette Boklund, Louise Lohse, Bertel Strandbygaard, Morten Rasmussen, Thomas Yssing Michaelsen, Sten Mortensen, Anders Fomsgaard, Graham J Belsham, Anette Bøtner
Published 2021-11-01

SARS-CoV-2 Transmission between Mink (Neovison vison) and Humans, Denmark

by Anne Sofie Hammer, Michelle Lauge Quaade, Thomas Bruun Rasmussen, Jannik Fonager, Morten Rasmussen, Karin Mundbjerg, Louise Lohse, Bertel Strandbygaard, Charlotte Sværke Jørgensen, Alonzo Alfaro-Núñez, Maiken Worsøe Rosenstierne, Anette Boklund, Tariq Halasa, Anders Fomsgaard, Graham J. Belsham, Anette Bøtner
Published 2021-02-01

Increased transmissibility of SARS-CoV-2 lineage B.1.1.7 by age and viral load

by Frederik Plesner Lyngse, Kåre Mølbak, Robert Leo Skov, Lasse Engbo Christiansen, Laust Hvas Mortensen, Mads Albertsen, Camilla Holten Møller, Tyra Grove Krause, Morten Rasmussen, Thomas Yssing Michaelsen, Marianne Voldstedlund, Jannik Fonager, Nina Steenhard, The Danish Covid-19 Genome Consortium, Carsten Thure Kirkeby
Published 2021-12-01

Rapid and Flexible RT-qPCR Surveillance Platforms To Detect SARS-CoV-2 Mutations

by Katja Spiess, Vithiagaran Gunalan, Ellinor Marving, Sofie Holdflod Nielsen, Michelle G. P. Jørgensen, Anna S. Fomsgaard, Line Nielsen, Alonzo Alfaro-Núñez, Søren M. Karst, Shila Mortensen, Morten Rasmussen, Ria Lassaunière, Maiken Worsøe Rosenstierne, Charlotta Polacek, Jannik Fonager, Arieh S. Cohen, Claus Nielsen, Anders Fomsgaard
Published 2023-02-01

Vaccine effectiveness against SARS-CoV-2 infection or COVID-19 hospitalization with the Alpha, Delta, or Omicron SARS-CoV-2 variant: A nationwide Danish cohort study.

by Mie Agermose Gram, Hanne-Dorthe Emborg, Astrid Blicher Schelde, Nikolaj Ulrik Friis, Katrine Finderup Nielsen, Ida Rask Moustsen-Helms, Rebecca Legarth, Janni Uyen Hoa Lam, Manon Chaine, Aisha Zahoor Malik, Morten Rasmussen, Jannik Fonager, Raphael Niklaus Sieber, Marc Stegger, Steen Ethelberg, Palle Valentiner-Branth, Christian Holm Hansen
Published 2022-09-01

Household transmission of SARS-CoV-2 Omicron variant of concern subvariants BA.1 and BA.2 in Denmark

by Frederik Plesner Lyngse, Carsten Thure Kirkeby, Matthew Denwood, Lasse Engbo Christiansen, Kåre Mølbak, Camilla Holten Møller, Robert Leo Skov, Tyra Grove Krause, Morten Rasmussen, Raphael Niklaus Sieber, Thor Bech Johannesen, Troels Lillebaek, Jannik Fonager, Anders Fomsgaard, Frederik Trier Møller, Marc Stegger, Maria Overvad, Katja Spiess, Laust Hvas Mortensen
Published 2022-09-01

Visualisation and quantitative analysis of the rodent malaria liver stage by real time imaging.

by Ivo H J Ploemen, Miguel Prudêncio, Bruno G Douradinha, Jai Ramesar, Jannik Fonager, Geert-Jan van Gemert, Adrian J F Luty, Cornelus C Hermsen, Robert W Sauerwein, Fernanda G Baptista, Maria M Mota, Andrew P Waters, Ivo Que, Clemens W G M Lowik, Shahid M Khan, Chris J Janse, Blandine M D Franke-Fayard
Published 2009-11-01

Variant Exported Blood-Stage Proteins Encoded by Plasmodium Multigene Families Are Expressed in Liver Stages Where They Are Exported into the Parasitophorous Vacuole.

by Aurélie Fougère, Andrew P Jackson, Dafni Paraskevi Bechtsi, Joanna A M Braks, Takeshi Annoura, Jannik Fonager, Roberta Spaccapelo, Jai Ramesar, Séverine Chevalley-Maurel, Onny Klop, Annelies M A van der Laan, Hans J Tanke, Clemens H M Kocken, Erica M Pasini, Shahid M Khan, Ulrike Böhme, Christiaan van Ooij, Thomas D Otto, Chris J Janse, Blandine Franke-Fayard
Published 2016-11-01