TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

by Jan P. Meier-Kolthoff, Markus Göker
Published 2019-05-01

Whole-Genome Sequencing Redefines Shewanella Taxonomy

by Kaisa Thorell, Jan P. Meier-Kolthoff, Åsa Sjöling, Alberto J. Martín-Rodríguez
Published 2019-08-01

Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order Methylococcales) Calls for the Reclassification of Members at the Genus and Species Levels

by Fabini D. Orata, Fabini D. Orata, Jan P. Meier-Kolthoff, Dominic Sauvageau, Lisa Y. Stein
Published 2018-12-01

Correction: Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex.

by Daniel Garrido-Sanz, Jan P Meier-Kolthoff, Markus Göker, Marta Martín, Rafael Rivilla, Miguel Redondo-Nieto
Published 2016-01-01

Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex.

by Daniel Garrido-Sanz, Jan P Meier-Kolthoff, Markus Göker, Marta Martín, Rafael Rivilla, Miguel Redondo-Nieto
Published 2016-01-01

Panoramic Insights into Microevolution and Macroevolution of A Prevotella copri-containing Lineage in Primate Guts

by Hao Li, Jan P. Meier-Kolthoff, Canxin Hu, Zhongjie Wang, Jun Zhu, Wei Zheng, Yun Tian, Feng Guo
Published 2022-04-01

Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio.

by Anne-Catherine Ahn, Jan P Meier-Kolthoff, Lex Overmars, Michael Richter, Tanja Woyke, Dimitry Y Sorokin, Gerard Muyzer
Published 2017-01-01

Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets.

by Aitor Blanco-Míguez, Jan P Meier-Kolthoff, Alberto Gutiérrez-Jácome, Markus Göker, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço
Published 2016-12-01

Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes

by Marina García-López, Jan P. Meier-Kolthoff, Brian J. Tindall, Sabine Gronow, Tanja Woyke, Nikos C. Kyrpides, Richard L. Hahnke, Markus Göker
Published 2019-09-01

Corrigendum: Genotype–phenotype correlations within the Geodermatophilaceae

by Maria del Carmen Montero-Calasanz, Maria del Carmen Montero-Calasanz, Adnan Yaramis, Manfred Rohde, Peter Schumann, Hans-Peter Klenk, Jan P. Meier-Kolthoff
Published 2023-01-01

Genotype–phenotype correlations within the Geodermatophilaceae

by Maria del Carmen Montero-Calasanz, Maria del Carmen Montero-Calasanz, Adnan Yaramis, Manfred Rohde, Peter Schumann, Hans-Peter Klenk, Jan P. Meier-Kolthoff
Published 2022-11-01

The Biofilm Inhibitor Carolacton Enters Gram-Negative Cells: Studies Using a TolC-Deficient Strain of <named-content content-type="genus-species">Escherichia coli</named-content>

by Jannik Donner, Michael Reck, Boyke Bunk, Michael Jarek, Constantin Benjamin App, Jan P. Meier-Kolthoff, Jörg Overmann, Rolf Müller, Andreas Kirschning, Irene Wagner-Döbler
Published 2017-10-01

Still Something to Discover: Novel Insights into <i>Escherichia coli</i> Phage Diversity and Taxonomy

by Imke H. E. Korf, Jan P. Meier-Kolthoff, Evelien M. Adriaenssens, Andrew M. Kropinski, Manfred Nimtz, Manfred Rohde, Mark J. van Raaij, Johannes Wittmann
Published 2019-05-01

Genome-Based Taxonomic Classification of the Phylum Actinobacteria

by Imen Nouioui, Lorena Carro, Marina García-López, Jan P. Meier-Kolthoff, Tanja Woyke, Nikos C. Kyrpides, Rüdiger Pukall, Hans-Peter Klenk, Michael Goodfellow, Markus Göker
Published 2018-08-01

Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria

by Anton Hördt, Marina García López, Jan P. Meier-Kolthoff, Marcel Schleuning, Lisa-Maria Weinhold, Lisa-Maria Weinhold, Brian J. Tindall, Sabine Gronow, Nikos C. Kyrpides, Tanja Woyke, Markus Göker
Published 2020-04-01

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes

by Richard L. Hahnke, Jan P. Meier-Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia N. Ivanova, Tanja Woyke, Nikos C. Kyrpides, Nikos C. Kyrpides, Hans-Peter Klenk, Markus Göker
Published 2018-02-01

Genome-Based Taxonomic Classification of Bacteroidetes

by Richard L. Hahnke, Jan P. Meier-Kolthoff, Marina García-López, Supratim Mukherjee, Marcel Huntemann, Natalia N. Ivanova, Tanja Woyke, Nikos C. Kyrpides, Nikos C. Kyrpides, Hans-Peter Klenk, Markus Göker
Published 2016-12-01

Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae

by Maria del Carmen Montero-Calasanz, Maria del Carmen Montero-Calasanz, Jan P. Meier-Kolthoff, Dao-Feng Zhang, Adnan Yaramis, Adnan Yaramis, Manfred Rohde, Tanja Woyke, Nikos C. Kyrpides, Peter Schumann, Wen-Jun Li, Markus Göker
Published 2017-12-01

A single-cell genomics pipeline for environmental microbial eukaryotes

by Doina Ciobanu, Alicia Clum, Steven Ahrendt, William B. Andreopoulos, Asaf Salamov, Sandy Chan, C. Alisha Quandt, Brian Foster, Jan P. Meier-Kolthoff, Yung Tsu Tang, Patrick Schwientek, Gerald L. Benny, Matthew E. Smith, Diane Bauer, Shweta Deshpande, Kerrie Barry, Alex Copeland, Steven W. Singer, Tanja Woyke, Igor V. Grigoriev, Timothy Y. James, Jan-Fang Cheng
Published 2021-04-01

Four principles to establish a universal virus taxonomy

by Peter Simmonds, Evelien M. Adriaenssens, F. Murilo Zerbini, Nicola G. A. Abrescia, Pakorn Aiewsakun, Poliane Alfenas-Zerbini, Yiming Bao, Jakub Barylski, Christian Drosten, Siobain Duffy, W. Paul Duprex, Bas E. Dutilh, Santiago F. Elena, Maria Laura García, Sandra Junglen, Aris Katzourakis, Eugene V. Koonin, Mart Krupovic, Jens H. Kuhn, Amy J. Lambert, Elliot J. Lefkowitz, Małgorzata Łobocka, Cédric Lood, Jennifer Mahony, Jan P. Meier-Kolthoff, Arcady R. Mushegian, Hanna M. Oksanen, Minna M. Poranen, Alejandro Reyes-Muñoz, David L. Robertson, Simon Roux, Luisa Rubino, Sead Sabanadzovic, Stuart Siddell, Tim Skern, Donald B. Smith, Matthew B. Sullivan, Nobuhiro Suzuki, Dann Turner, Koenraad Van Doorslaer, Anne-Mieke Vandamme, Arvind Varsani, Nikos Vasilakis
Published 2023-02-01