Grounded: Transcriptional Pausing in Naive mESCs

by Guenther, Matthew G., Young, Richard A., Young, Richard A.
Published 2014

Repressive Transcription

by Young, Richard A., Guenther, Matthew
Published 2013

Chromatin Structure and Gene Expression Programs of Human Embryonic and Induced Pluripotent Stem Cells

by Guenther, Matthew G., Frampton, Garrett M., Soldner, Frank, Hockemeyer, Dirk, Mitalipova, Maya, Jaenisch, Rudolf, Young, Richard A.
Published 2015

Derivation of Pre-X Inactivation Human Embryonic Stem Cells under Physiological Oxygen Concentrations

by Lengner, Christopher J., Gimelbrant, Alexander A., Erwin, Jennifer A., Cheng, Albert W., Guenther, Matthew G., Welstead, G. Grant, Alagappan, Raaji, Frampton, Garrett M., Xu, Ping, Muffat, Julien, Santagata, Sandro, Powers, Doug, Barrett, C. Brent, Young, Richard A., Lee, Jeannie T., Jaenisch, Rudolf, Mitalipova, Maisam
Published 2015

Evidence That Gene Activation and Silencing during Stem Cell Differentiation Requires a Transcriptionally Paused Intermediate State

by Golob, Jonathan L., Pabon, Lil M., Pratt, Gabriel A., Loring, Jeanne F., Laurent, Louise C., Murry, Charles E., Kumar, Roshan, Guenther, Matthew, Young, Richard A.
Published 2018

Genome-wide determination of drug localization

by Anders, Lars, Guenther, Matthew G., Qi, Jun, Fan, Zi Peng, Marineau, Jason J., Rahl, Peter B., Lovén, Jakob, Sigova, Alla A., Smith, William B., Lee, Tong Ihn, Bradner, James E., Young, Richard A.
Published 2014

Genome-wide localization of small molecules

by Anders, Lars, Guenther, Matthew G., Qi, Jun, Fan, Zi Peng, Marineau, Jason J, Rahl, Peter B, Sigova, Alla A, Smith, William B, Lee, Tong Ihn, Bradner, James E., Young, Richard A., Loven, Jakob
Published 2015

Master Transcription Factors Determine Cell-Type-Specific Responses to TGF-β Signaling

by Mullen, Alan C., Orlando, David A., Newman, Jamie Jennifer, Loven, Jakob, Kumar, Roshan M., Bilodeau, Steve, Reddy, Jessica, Guenther, Matthew G., DeKoter, Rodney P., Young, Richard A.
Published 2014

CpG island structure and trithorax/polycomb chromatin domains in human cells

by Orlando, David A., Guenther, Matthew G., Frampton, Garrett M., Young, Richard A.
Published 2016

Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

by Almada, Albert Ernesto, Lin, Charles, Sharp, Phillip A., Young, Richard A., Sigova, Alla A., Mullen, Alan C., Molinie, Benoit, Gupta, Sumeet, Orlando, David A., Guenther, Matthew G., Giallourakis, Cosmas C.
Published 2013