CGHScan: finding variable regions using high-density microarray comparative genomic hybridization data

by Rajashekara Gireesh, Glasner Jeremy D, Biehl Bryan S, Scott Abigail A, Gilson Michael C, Anderson Bradley D, Splitter Gary A, Perna Nicole T
Published 2006-04-01

Broadening the horizon – level 2.5 of the HUPO-PSI format for molecular interactions

by Cusick Michael E, Cerami Ethan, Salwinski Lukasz, Nerothin Jason, Stümpflen Volker, Oesterheld Matthias, Chatr-aryamontri Andrew, Ceol Arnaud, Moore Susan, Salama John J, Sherman David, Tyers Mike, Wojcik Jérôme, Xenarios Ioannis, Bader Gary D, Vinod Nisha, Quinn Antony F, Aranda Bruno, Montecchi-Palazzi Luisa, Orchard Sandra, Kerrien Samuel, Vidal Marc, Gilson Michael, Armstrong John, Woollard Peter, Hogue Christopher, Eisenberg David, Cesareni Gianni, Apweiler Rolf, Hermjakob Henning
Published 2007-10-01

Erratum to: Lessons learned from comparing molecular dynamics engines on the SAMPL5 dataset.

by Shirts, Michael R, Klein, Christoph, Swails, Jason M, Yin, Jian, Gilson, Michael K, Mobley, David L, Case, David A, Zhong, Ellen D
Published 2017

PathInsight: A Novel Tool for Modeling Biomolecular Pathways

by Venkat, Aarya
Published 2017

Generalized Born Models in Calculations of Host-Guest Binding Affinity

by Wang, Liangyue
Published 2020

Discovering de novo peptide substrates for enzymes using machine learning.

by Tallorin, Lorillee, Wang, JiaLei, Kim, Woojoo E, Sahu, Swagat, Kosa, Nicolas M, Yang, Pu, Thompson, Matthew, Gilson, Michael K, Frazier, Peter I, Burkart, Michael D, Gianneschi, Nathan C
Published 2018

Towards Improved Force-Field Accuracy for Calculation of Binding Thermodynamics

by Kantonen, Sophie Michelle
Published 2020

Charge as a Selection Criterion for Translocation through the Nuclear Pore Complex

by Colwell, Lucy Jane, Brenner, Michael P., Ribbeck, Katharina, Gilson, Michael
Published 2010

Theory and Modeling of Molecular Motion out of Equilibrium

by Feng, Mudong
Published 2022

Noncovalent Interactions: Evaluation of computational methods and characterization of molecular binding

by Li, Amanda
Published 2016

Lessons learned from comparing molecular dynamics engines on the SAMPL5 dataset.

by Shirts, Michael R, Klein, Christoph, Swails, Jason M, Yin, Jian, Gilson, Michael K, Mobley, David L, Case, David A, Zhong, Ellen D
Published 2017

Structural insights into the gating of DNA passage by the topoisomerase II DNA-gate.

by Chen, Shin-Fu, Huang, Nan-Lan, Lin, Jung-Hsin, Wu, Chyuan-Chuan, Wang, Ying-Ren, Yu, Yu-Jen, Gilson, Michael K, Chan, Nei-Li
Published 2018

Additivity in the Analysis and Design of HIV Protease Inhibitors

by Jorissen, Robert N., Kumar Reddy, G. S. Kiran, Ali, Akbar, Altman, Michael D., Chellappan, Sripriya, Anjum, Saima G., Tidor, Bruce, Schiffer, Celia A., Rana, Tariq M., Gilson, Michael K.
Published 2012

Predicting binding free energies: Frontiers and benchmarks (a perpetual review)

by Mobley, David L, Heinzelmann, Germano, Henriksen, Niel M., Gilson, Michael K
Published 2017

BindingDB in 2015: A public database for medicinal chemistry, computational chemistry and systems pharmacology.

by Gilson, Michael K, Liu, Tiqing, Baitaluk, Michael, Nicola, George, Hwang, Linda, Chong, Jenny
Published 2016

The two sides of complement C3d: evolution of electrostatics in a link between innate and adaptive immunity.

by Kieslich, Chris A, Morikis, Dimitrios
Published 2012

Whole-Genome and RNA Sequencing Reveal Variation and Transcriptomic Coordination in the Developing Human Prefrontal Cortex.

by Werling, Donna M, Pochareddy, Sirisha, Choi, Jinmyung, An, Joon-Yong, Sheppard, Brooke, Peng, Minshi, Li, Zhen, Dastmalchi, Claudia, Santpere, Gabriel, Sousa, André MM, Tebbenkamp, Andrew TN, Kaur, Navjot, Gulden, Forrest O, Breen, Michael S, Liang, Lindsay, Gilson, Michael C, Zhao, Xuefang, Dong, Shan, Klei, Lambertus, Cicek, A Ercument, Buxbaum, Joseph D, Adle-Biassette, Homa, Thomas, Jean-Leon, Aldinger, Kimberly A, O'Day, Diana R, Glass, Ian A, Zaitlen, Noah A, Talkowski, Michael E, Roeder, Kathryn, State, Matthew W, Devlin, Bernie, Sanders, Stephan J, Sestan, Nenad
Published 2020

Broadening the Horizon – Level 2.5 of the HUPO-PSI Format for Molecular Interactions

by Kerrien, Samuel, Orchard, Sandra, Montecchi-Palazzi, Luisa, Aranda, Bruno, Quinn, Antony F, Vinod, Nisha, Bader, Gary D, Xenarios, Ioannis, Wojcik, Jérôme, Tyers, Mike, Salama, John J, Ceol, Arnaud, Chatr-aryamontri, Andrew, Oesterheld, Matthias, Stümpflen, Volker, Salwinski, Lukasz, Nerothin, Jason, Cerami, Ethan, Gilson, Michael, Armstrong, John, Woollard, Peter, Hogue, Christopher, Cesareni, Gianni, Apweiler, Rolf, Hermjakob, Henning, Sherman, David Joseph, Moore, Susan, Cusick, Michael, Vidal, Marc, Eisenberg, David Miles
Published 2013

Charge Optimization Theory for Induced-Fit Ligands

by Shen, Yang, Gilson, Michael K., Tidor, Bruce
Published 2013