Dynamic DNA cytosine methylation in the <it>Populus trichocarpa </it>genome: tissue-level variation and relationship to gene expression

by Vining Kelly J, Pomraning Kyle R, Wilhelm Larry J, Priest Henry D, Pellegrini Matteo, Mockler Todd C, Freitag Michael, Strauss Steven H
Published 2012-01-01

The fungus <it>Neurospora crassa </it>displays telomeric silencing mediated by multiple sirtuins and by methylation of histone H3 lysine 9

by Smith Kristina M, Kothe Gregory O, Matsen Cindy B, Khlafallah Tamir K, Adhvaryu Keyur K, Hemphill Melissa, Freitag Michael, Motamedi Mohammad R, Selker Eric U
Published 2008-11-01

Developmental variation in DNA methylation in poplar (<it>Populus trichocarpa</it>)

by Vining Kelly, Pomraning Kyle R, Wilhelm Larry, Priest Henry D, Ma Cathleen, Zhu Ruoqing, Etherington Elizabeth, Pellegrini Matteo, Mockler Todd, Freitag Michael, Strauss Steven H
Published 2011-09-01

Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergen...

by Manning, Viola A., Pandelova, Iovanna, Dhillon, Braham, Wilhelm, Larry J., Goodwin, Stephen B., Berlin, Aaron M., Figueroa, Melania, Freitag, Michael, Hane, James K., Henrissat, Bernard, Holman, Wade H., Kodira, Chinnappa D., Martin, Joel, Oliver, Richard P., Robbertse, Barbara, Schackwitz, Wendy, Schwartz, David C., Spatafora, Joseph W., Turgeon, B. Gillian, Yandava, Chandri, Young, Sarah, Zhou, Shiguo, Zeng, Qiandong, Grigoriev, Igor V., Ma, Li-Jun, Ciuffetti, Lynda M.
Published 2013

The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution.

by Traeger, Stefanie, Altegoer, Florian, Freitag, Michael, Gabaldon, Toni, Kempken, Frank, Kumar, Abhishek, Marcet-Houben, Marina, Pöggeler, Stefanie, Stajich, Jason E, Nowrousian, Minou
Published 2013

The Fungus Neurospora crassa Displays Telomeric Silencing Mediated by Multiple Sirtuins and by Methylation of Histone H3 Lysine 9

by Smith, Kristina M, Kothe, Gregory O, Matsen, Cindy B, Khlafallah, Tamir K, Adhvaryu, Keyur K, Hemphill, Melissa, Freitag, Michael, Motamedi, Mohammad, Selker, Eric U
Published 2013

Genome compartmentalization predates species divergence in the plant pathogen genus Zymoseptoria

by Feurtey, Alice, Lorrain, Cécile, Croll, Daniel, Eschenbrenner, Christoph, Freitag, Michael, Habig, Michael, Haueisen, Janine, Möller, Mareike, Schotanus, Klaas, Stukenbrock, Eva H.
Published 2020

De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis.

by Nowrousian, Minou, Stajich, Jason E, Chu, Meiling, Engh, Ines, Espagne, Eric, Halliday, Karen, Kamerewerd, Jens, Kempken, Frank, Knab, Birgit, Kuo, Hsiao-Che, Osiewacz, Heinz D, Pöggeler, Stefanie, Read, Nick D, Seiler, Stephan, Smith, Kristina M, Zickler, Denise, Kück, Ulrich, Freitag, Michael
Published 2010

Genome-Wide Analysis of Copy Number Variants in Attention Deficit Hyperactivity Disorder: The Role of Rare Variants and Duplications at 15q13.3

by Williams, Nigel M., Franke, Barbara, Mick, Eric, Anney, Richard J.L., Freitag, Christine M., Gill, Michael, Thapar, Anita, O'Donovan, Michael C., Owen, Michael J., Holmans, Peter, Kent, Lindsey, Middleton, Frank, Zhang-James, Yanli, Liu, Lu, Meyer, Jobst, Nguyen, Thuy Trang, Romanos, Jasmin, Romanos, Marcel, Seitz, Christiane, Renner, Tobias J., Walitza, Susanne, Warnke, Andreas, Palmason, Haukur, Buitelaar, Jan, Rommelse, Nanda, Vasquez, Alejandro Arias, Hawi, Ziarih, Langley, Kate, Sergeant, Joseph, Steinhausen, Hans-Christoph, Roeyers, Herbert, Biederman, Joseph, Zaharieva, Irina, Hakonarson, Hakon, Elia, Josephine, Lionel, Anath C., Crosbie, Jennifer, Marshall, Christian R., Schachar, Russell, Scherer, Stephen W., Todorov, Alexandre, Smalley, Susan L., Loo, Sandra, Nelson, Stanley, Shtir, Corina, Asherson, Philip, Reif, Andreas, Lesch, Klaus-Peter, Faraone, Stephen V.
Published 2013

Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic Fusarium that Includes the Fusarium solani Species Complex.

by Geiser, David M, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus JN, Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward CY, Lofton, Lily W, Logrieco, Antonio F, López-Berges, Manuel S, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, NMI, Monod, Michel, Moretti, Antonio, Mostert, Diane, Mulè, Giuseppina
Published 2021