A comparison of RNA amplification techniques at sub-nanogram input concentration

by Federman Scot, Wang Gang, Makrigiorgos G Mike, Scott Janet H, Magbanua Mark, Lang Julie E, Esserman Laura J, Park John W, Haqq Christopher M
Published 2009-07-01

Author Correction: Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance.

by Deng, Xianding, Achari, Asmeeta, Federman, Scot, Yu, Guixia, Somasekar, Sneha, Bártolo, Inês, Yagi, Shigeo, Mbala-Kingebeni, Placide, Kapetshi, Jimmy, Ahuka-Mundeke, Steve, Muyembe-Tamfum, Jean-Jacques, Ahmed, Asim A, Ganesh, Vijay, Tamhankar, Manasi, Patterson, Jean L, Ndembi, Nicaise, Mbanya, Dora, Kaptue, Lazare, McArthur, Carole, Muñoz-Medina, José E, Gonzalez-Bonilla, Cesar R, López, Susana, Arias, Carlos F, Arevalo, Shaun, Miller, Steve, Stone, Mars, Busch, Michael, Hsieh, Kristina, Messenger, Sharon, Wadford, Debra A, Rodgers, Mary, Cloherty, Gavin, Faria, Nuno R, Thézé, Julien, Pybus, Oliver G, Neto, Zoraima, Morais, Joana, Taveira, Nuno, Hackett, John R, Chiu, Charles Y
Published 2020

Associations of Early COVID-19 Cases in San Francisco With Domestic and International Travel.

by Gu, Wei, Deng, Xianding, Reyes, Kevin, Hsu, Elaine, Wang, Candace, Sotomayor-Gonzalez, Alicia, Federman, Scot, Bushnell, Brian, Miller, Steve, Chiu, Charles Y
Published 2020

Diagnosis of Fatal Human Case of St. Louis Encephalitis Virus Infection by Metagenomic Sequencing, California, 2016.

by Chiu, Charles Y, Coffey, Lark L, Murkey, Jamie, Symmes, Kelly, Sample, Hannah A, Wilson, Michael R, Naccache, Samia N, Arevalo, Shaun, Somasekar, Sneha, Federman, Scot, Stryke, Doug, Vespa, Paul, Schiller, Gary, Messenger, Sharon, Humphries, Romney, Miller, Steve, Klausner, Jeffrey D
Published 2017

Actionable diagnosis of neuroleptospirosis by next-generation sequencing.

by Wilson, Michael R, Naccache, Samia N, Samayoa, Erik, Biagtan, Mark, Bashir, Hiba, Yu, Guixia, Salamat, Shahriar M, Somasekar, Sneha, Federman, Scot, Miller, Steve, Sokolic, Robert, Garabedian, Elizabeth, Candotti, Fabio, Buckley, Rebecca H, Reed, Kurt D, Meyer, Teresa L, Seroogy, Christine M, Galloway, Renee, Henderson, Sheryl L, Gern, James E, DeRisi, Joseph L, Chiu, Charles Y
Published 2014

Introduction, Transmission Dynamics, and Fate of Early Severe Acute Respiratory Syndrome Coronavirus 2 Lineages in Santa Clara County, California.

by Villarino, Elsa, Deng, Xianding, Kemper, Carol A, Jorden, Michelle A, Bonin, Brandon, Rudman, Sarah L, Han, George S, Yu, Guixia, Wang, Candace, Federman, Scot, Bushnell, Brian, CZB COVIDTracker Consortium, Wadford, Debra A, Lin, Wen, Tao, Ying, Paden, Clinton R, Bhatnagar, Julu, MacCannell, Tara, Tong, Suxiang, Batson, Joshua, Chiu, Charles Y
Published 2021

A comparison of RNA amplification techniques at sub-nanogram input concentration

by Lang, Julie E, Magbanua, Mark, Scott, Janet H, Makrigiorgos, G Mike, Wang, Gang, Federman, Scot, Esserman, Laura J, Park, John W, Haqq, Christopher M
Published 2009

A diagnostic host response biosignature for COVID-19 from RNA profiling of nasal swabs and blood.

by Ng, Dianna L, Granados, Andrea C, Santos, Yale A, Servellita, Venice, Goldgof, Gregory M, Meydan, Cem, Sotomayor-Gonzalez, Alicia, Levine, Andrew G, Balcerek, Joanna, Han, Lucy M, Akagi, Naomi, Truong, Kent, Neumann, Neil M, Nguyen, David N, Bapat, Sagar P, Cheng, Jing, Martin, Claudia Sanchez-San, Federman, Scot, Foox, Jonathan, Gopez, Allan, Li, Tony, Chan, Ray, Chu, Cynthia S, Wabl, Chiara A, Gliwa, Amelia S, Reyes, Kevin, Pan, Chao-Yang, Guevara, Hugo, Wadford, Debra, Miller, Steve, Mason, Christopher E, Chiu, Charles Y
Published 2021

Metagenomic sequencing of stool samples in Bangladeshi infants: virome association with poliovirus shedding after oral poliovirus vaccination.

by Tan, Susanna K, Granados, Andrea C, Bouquet, Jerome, Hoy-Schulz, Yana Emmy, Green, Lauri, Federman, Scot, Stryke, Doug, Haggerty, Thomas D, Ley, Catherine, Yeh, Ming-Te, Jannat, Kaniz, Maldonado, Yvonne A, Andino, Raul, Parsonnet, Julie, Chiu, Charles Y
Published 2020

A Comparison of RNA Amplification Techniques at Sub-Nanogram Input Concentration

by Lang, Julie E, Magbanua, Mark Jesus M, Scott, Janet H, Makrigiorgos, Gerassimos M., Wang, Gang, Federman, Scot, Esserman, Laura J, Park, John W., Haqq, Christopher M
Published 2013

Detection of cryptogenic malignancies from metagenomic whole genome sequencing of body fluids.

by Gu, Wei, Talevich, Eric, Hsu, Elaine, Qi, Zhongxia, Urisman, Anatoly, Federman, Scot, Gopez, Allan, Arevalo, Shaun, Gottschall, Marc, Liao, Linda, Tung, Jack, Chen, Lei, Lim, Harumi, Ho, Chandler, Kasowski, Maya, Oak, Jean, Holmes, Brittany J, Yeh, Iwei, Yu, Jingwei, Wang, Linlin, Miller, Steve, DeRisi, Joseph L, Prakash, Sonam, Simko, Jeff, Chiu, Charles Y
Published 2021

Transmission, infectivity, and neutralization of a spike L452R SARS-CoV-2 variant.

by Deng, Xianding, Garcia-Knight, Miguel A, Khalid, Mir M, Servellita, Venice, Wang, Candace, Morris, Mary Kate, Sotomayor-González, Alicia, Glasner, Dustin R, Reyes, Kevin R, Gliwa, Amelia S, Reddy, Nikitha P, Sanchez San Martin, Claudia, Federman, Scot, Cheng, Jing, Balcerek, Joanna, Taylor, Jordan, Streithorst, Jessica A, Miller, Steve, Sreekumar, Bharath, Chen, Pei-Yi, Schulze-Gahmen, Ursula, Taha, Taha Y, Hayashi, Jennifer M, Simoneau, Camille R, Kumar, G Renuka, McMahon, Sarah, Lidsky, Peter V, Xiao, Yinghong, Hemarajata, Peera, Green, Nicole M, Espinosa, Alex, Kath, Chantha, Haw, Monica, Bell, John, Hacker, Jill K, Hanson, Carl, Wadford, Debra A, Anaya, Carlos, Ferguson, Donna, Frankino, Phillip A, Shivram, Haridha, Lareau, Liana F, Wyman, Stacia K, Ott, Melanie, Andino, Raul, Chiu, Charles Y
Published 2021

Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance.

by Deng, Xianding, Achari, Asmeeta, Federman, Scot, Yu, Guixia, Somasekar, Sneha, Bártolo, Inês, Yagi, Shigeo, Mbala-Kingebeni, Placide, Kapetshi, Jimmy, Ahuka-Mundeke, Steve, Muyembe-Tamfum, Jean-Jacques, Ahmed, Asim A, Ganesh, Vijay, Tamhankar, Manasi, Patterson, Jean L, Ndembi, Nicaise, Mbanya, Dora, Kaptue, Lazare, McArthur, Carole, Muñoz-Medina, José E, Gonzalez-Bonilla, Cesar R, López, Susana, Arias, Carlos F, Arevalo, Shaun, Miller, Steve, Stone, Mars, Busch, Michael, Hsieh, Kristina, Messenger, Sharon, Wadford, Debra A, Rodgers, Mary, Cloherty, Gavin, Faria, Nuno R, Faria, Nuno R, Thézé, Julien, Pybus, Oliver G, Neto, Zoraima, Morais, Joana, Taveira, Nuno, R Hackett, John, Chiu, Charles Y
Published 2020

Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis.

by Wilson, Michael R, Sample, Hannah A, Zorn, Kelsey C, Arevalo, Shaun, Yu, Guixia, Neuhaus, John, Federman, Scot, Stryke, Doug, Briggs, Benjamin, Langelier, Charles, Berger, Amy, Douglas, Vanja, Josephson, S Andrew, Chow, Felicia C, Fulton, Brent D, DeRisi, Joseph L, Gelfand, Jeffrey M, Naccache, Samia N, Bender, Jeffrey, Dien Bard, Jennifer, Murkey, Jamie, Carlson, Magrit, Vespa, Paul M, Vijayan, Tara, Allyn, Paul R, Campeau, Shelley, Humphries, Romney M, Klausner, Jeffrey D, Ganzon, Czarina D, Memar, Fatemeh, Ocampo, Nicolle A, Zimmermann, Lara L, Cohen, Stuart H, Polage, Christopher R, DeBiasi, Roberta L, Haller, Barbara, Dallas, Ronald, Maron, Gabriela, Hayden, Randall, Messacar, Kevin, Dominguez, Samuel R, Miller, Steve, Chiu, Charles Y
Published 2019