Signed weighted gene co-expression network analysis of transcriptional regulation in murine embryonic stem cells

by Zhou Qing, Plath Kathrin, Fan Guoping, Mason Mike J, Horvath Steve
Published 2009-07-01

Recent advances in preimplantation genetic diagnosis and screening.

by Lu, Lina, Lv, Bo, Huang, Kevin, Xue, Zhigang, Zhu, Xianmin, Fan, Guoping
Published 2016

Stem cell-based therapy of corneal epithelial and endothelial diseases.

by Yuan, Songtao, Fan, Guoping
Published 2015

The naive state of human pluripotent stem cells: a synthesis of stem cell and preimplantation embryo transcriptome analyses.

by Huang, Kevin, Maruyama, Toru, Fan, Guoping
Published 2014

DNA methylation controls the timing of astrogliogenesis through regulation of JAK-STAT signaling

by Fan, Guoping, Martinowich, K, Chin, M H, He, F, Fouse, S D, Hutnick, L, Hattori, D, Ge, W H, Shen, Y, Hao, W, ten Hoeve, J, Shuai, K, Sun, Y E
Published 2005

Challenges and emerging directions in single-cell analysis

by Yuan, Guo-Cheng, Cai, Long, Elowitz, Michael, Enver, Tariq, Fan, Guoping, Guo, Guoji, Irizarry, Rafael, Kharchenko, Peter, Kim, Junhyong, Orkin, Stuart, Quackenbush, John, Saadatpour, Assieh, Schroeder, Timm, Shivdasani, Ramesh, Tirosh, Itay
Published 2017

Challenges and emerging directions in single-cell analysis

by Yuan, Guo-Cheng, Cai, Long, Elowitz, Michael, Enver, Tariq, Fan, Guoping, Guo, Guoji, Irizarry, Rafael, Kharchenko, Peter, Kim, Junhyong, Orkin, Stuart, Quackenbush, John, Saadatpour, Assieh, Schroeder, Timm, Shivdasani, Ramesh, Tirosh, Itay
Published 2017

The size of cell-free mitochondrial DNA in blood is inversely correlated with tumor burden in cancer patients.

by An, Qin, Hu, Youjin, Li, Qingjiao, Chen, Xufeng, Huang, Jiaoti, Pellegrini, Matteo, Zhou, Xianghong Jasmine, Rettig, Matthew, Fan, Guoping
Published 2019

Methyltransferase Dnmt3a upregulates HDAC9 to deacetylate the kinase TBK1 for activation of antiviral innate immunity.

by Li, Xia, Zhang, Qian, Ding, Yuanyuan, Liu, Yiqi, Zhao, Dezhi, Zhao, Kai, Shen, Qicong, Liu, Xingguang, Zhu, Xuhui, Li, Nan, Cheng, Zhongyi, Fan, Guoping, Wang, Qingqing, Cao, Xuetao
Published 2016

PIAS1 regulates breast tumorigenesis through selective epigenetic gene silencing.

by Liu, Bin, Tahk, Samuel, Yee, Kathleen M, Yang, Randy, Yang, Yonghui, Mackie, Ryan, Hsu, Cary, Chernishof, Vasili, O'Brien, Neil, Jin, Yusheng, Fan, Guoping, Lane, Timothy F, Rao, Jianyu, Slamon, Dennis, Shuai, Ke
Published 2014

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing.

by Xue, Zhigang, Huang, Kevin, Cai, Chaochao, Cai, Lingbo, Jiang, Chun-yan, Feng, Yun, Liu, Zhenshan, Zeng, Qiao, Cheng, Liming, Sun, Yi E, Liu, Jia-yin, Horvath, Steve, Fan, Guoping
Published 2013

Single-cell RNA-seq reveals distinct injury responses in different types of DRG sensory neurons.

by Hu, Ganlu, Huang, Kevin, Hu, Youjin, Du, Guizhen, Xue, Zhigang, Zhu, Xianmin, Fan, Guoping
Published 2016

Simultaneous profiling of transcriptome and DNA methylome from a single cell.

by Hu, Youjin, Huang, Kevin, An, Qin, Du, Guizhen, Hu, Ganlu, Xue, Jinfeng, Zhu, Xianmin, Wang, Cun-Yu, Xue, Zhigang, Fan, Guoping
Published 2016

Role of Tet1 and 5-hydroxymethylcytosine in cocaine action.

by Feng, Jian, Shao, Ningyi, Szulwach, Keith E, Vialou, Vincent, Huynh, Jimmy, Zhong, Chun, Le, Thuc, Ferguson, Deveroux, Cahill, Michael E, Li, Yujing, Koo, Ja Wook, Ribeiro, Efrain, Labonte, Benoit, Laitman, Benjamin M, Estey, David, Stockman, Victoria, Kennedy, Pamela, Couroussé, Thomas, Mensah, Isaac, Turecki, Gustavo, Faull, Kym F, Ming, Guo-li, Song, Hongjun, Fan, Guoping, Casaccia, Patrizia, Shen, Li, Jin, Peng, Nestler, Eric J
Published 2015

Single-cell RNA sequencing reveals heterogeneous tumor and immune cell populations in early-stage lung adenocarcinomas harboring EGFR mutations.

by He, Di, Wang, Di, Lu, Ping, Yang, Nan, Xue, Zhigang, Zhu, Xianmin, Zhang, Peng, Fan, Guoping
Published 2021

Single-Cell RNA Sequencing of hESC-Derived 3D Retinal Organoids Reveals Novel Genes Regulating RPC Commitment in Early Human Retinogenesis.

by Mao, Xiying, An, Qin, Xi, Huiyu, Yang, Xian-Jie, Zhang, Xiangmei, Yuan, Songtao, Wang, Jinmei, Hu, Youjin, Liu, Qinghuai, Fan, Guoping
Published 2019

Juvenile neurogenesis makes essential contributions to adult brain structure and plays a sex-dependent role in fear memories.

by Cushman, Jesse D, Maldonado, Jose, Kwon, Eunice E, Garcia, A Denise, Fan, Guoping, Imura, Tetsuya, Sofroniew, Michael V, Fanselow, Michael S
Published 2012

Selective demethylation and altered gene expression are associated with ICF syndrome in human-induced pluripotent stem cells and mesenchymal stem cells.

by Huang, Kevin, Wu, Zhourui, Liu, Zhenshan, Hu, Ganlu, Yu, Juehua, Chang, Kai H, Kim, Kee-Pyo, Le, Thuc, Faull, Kym F, Rao, Nagesh, Gennery, Andrew, Xue, Zhigang, Wang, Cun-Yu, Pellegrini, Matteo, Fan, Guoping
Published 2014

New Roles of DNA Methylation in the Epigenome and Developmental Overgrowth Syndrome

by King, Andrew D.
Published 2017

Epigenetic Gene Regulation in Stem Cell Differentiation and Reprogramming

by Huang, Kevin
Published 2013