Recombination and insertion events involving the botulinum neurotoxin complex genes in <it>Clostridium botulinum </it>types A, B, E and F and <it>Clostridium butyricum </it>type E...

by Smith Leonard A, Bruce David, Munk Amy C, Smith Theresa J, Foley Brian T, Xie Gary, Hill Karen K, Brettin Thomas S, Detter John C
Published 2009-10-01

A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon <it>Natrialba magadii</it> ATCC 43099^T

by Siddaramappa Shivakumara, Challacombe Jean F, DeCastro Rosana E, Pfeiffer Friedhelm, Sastre Diego E, Giménez María I, Paggi Roberto A, Detter John C, Davenport Karen W, Goodwin Lynne A, Kyrpides Nikos, Tapia Roxanne, Pitluck Samuel, Lucas Susan, Woyke Tanja, Maupin-Furlow Julie A
Published 2012-05-01

Comparative metagenomics of microbial communities

by Tringe, Susannah Green, von Mering, Christian, Kobayashi, Arthur, Salamov, Asaf A., Chen, Kevin, Chang, Hwai W., Podar, Mircea, Short, Jay M., Mathur, Eric J., Detter, John C., Bork, Peer, Hugenholtz, Philip, Rubin, Edward M.
Published 2004

Phi29 DNA polymerase based rolling circle amplification of templates for DNA sequencing

by Detter, John C., Nelson, John R., Richardson, Paul M.
Published 2004

Complete genome sequence of Atopobium parvulum type strain (IPP 1246).

by Copeland, Alex, Sikorski, Johannes, Lapidus, Alla, Nolan, Matt, Del Rio, Tijana Glavina, Lucas, Susan, Chen, Feng, Tice, Hope, Pitluck, Sam, Cheng, Jan-Fang, Pukall, Rüdiger, Chertkov, Olga, Brettin, Thomas, Han, Cliff, Detter, John C, Kuske, Cheryl, Bruce, David, Goodwin, Lynne, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Chen, Amy, Palaniappan, Krishna, Chain, Patrick, Rohde, Manfred, Göker, Markus, Bristow, Jim, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2009

Complete genome sequence of Treponema succinifaciens type strain (6091).

by Han, Cliff, Gronow, Sabine, Teshima, Hazuki, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Zeytun, Ahmed, Tapia, Roxanne, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Huntemann, Marcel, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Rohde, Manfred, Göker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2011

Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1(T)).

by Han, Cliff, Kotsyurbenko, Oleg, Chertkov, Olga, Held, Brittany, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxanne, Goodwin, Lynne A, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Brambilla, Evelyne-Marie, Rohde, Manfred, Spring, Stefan, Sikorski, Johannes, Göker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2012

Complete genome sequence of Kangiella koreensis type strain (SW-125).

by Han, Cliff, Sikorski, Johannes, Lapidus, Alla, Nolan, Matt, Glavina Del Rio, Tijana, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Copeland, Alex, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Chain, Patrick, Saunders, Elizabeth, Brettin, Thomas, Göker, Markus, Tindall, Brian J, Bristow, Jim, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2009

Complete genome sequence of Thermaerobacter marianensis type strain (7p75a).

by Han, Cliff, Gu, Wei, Zhang, Xiaojing, Lapidus, Alla, Nolan, Matt, Copeland, Alex, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxane, Goodwin, Lynne, Pitluck, Sam, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Schneider, Susanne, Rohde, Manfred, Göker, Markus, Pukall, Rüdiger, Woyke, Tanja, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2010

Complete genome sequence of Rhodothermus marinus type strain (R-10).

by Nolan, Matt, Tindall, Brian J, Pomrenke, Helga, Lapidus, Alla, Copeland, Alex, Glavina Del Rio, Tijana, Lucas, Susan, Chen, Feng, Tice, Hope, Cheng, Jan-Fang, Saunders, Elizabeth, Han, Cliff, Bruce, David, Goodwin, Lynne, Chain, Patrick, Pitluck, Sam, Ovchinikova, Galina, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D, Brettin, Thomas, Göker, Markus, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2009

Complete genome sequence of Syntrophobotulus glycolicus type strain (FlGlyR).

by Han, Cliff, Mwirichia, Romano, Chertkov, Olga, Held, Brittany, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxanne, Goodwin, Lynne, Pitluck, Sam, Huntemann, Marcel, Liolios, Konstantinos, Ivanova, Natalia, Pagani, Ioanna, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Rohde, Manfred, Spring, Stefan, Sikorski, Johannes, Göker, Markus, Woyke, Tanja, Bristow, James, Eisen, Jonathan A, Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Detter, John C
Published 2011

Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains

by Kyrpides, Nikos C., Hugenholtz, Philip, Eisen, Jonathan A., Woyke, Tanja, Goeker, Markus, Parker, Charles T., Amann, Rudolf, Beck, Brian J., Chain, Patrick S. G., Chun, Jongsik, Colwell, Rita R., Danchin, Antoine, Dawyndt, Peter, Dedeurwaerdere, Tom, DeLong, Edward F., Detter, John C., De Vos, Paul, Donohue, Timothy J., Dong, Xiu-Zhu, Ehrlich, Dusko S., Fraser, Claire, Gibbs, Richard, Gilbert, Jack, Gilna, Paul, Glockner, Frank Oliver, Jansson, Janet K., Keasling, Jay D., Knight, Rob, Labeda, David, Lapidus, Alla, Lee, Jung-Sook, Li, Wen-Jun, Ma, Juncai, Markowitz, Victor, Moore, Edward R. B., Morrison, Mark, Meyer, Folker, Nelson, Karen E., Ohkuma, Moriya, Ouzounis, Christos A., Pace, Norman, Parkhill, Julian, Qin, Nan, Rossello-Mora, Ramon, Sikorski, Johannes, Smith, David, Sogin, Mitch, Stevens, Rick, Stingl, Uli, Suzuki, Ken-ichiro, Taylor, Dorothea, Tiedje, Jim M., Tindall, Brian, Wagner, Michael, Weinstock, George, Weissenbach, Jean, White, Owen, Wang, Jun, Zhang, Lixin, Zhou, Yu-Guang, Field, Dawn, Whitman, William B., Garrity, George M., Klenk, Hans-Peter
Published 2020

The sequence and analysis of duplication rich human chromosome 16

by Martin, Joel, Han, Cliff, Gordon, Laurie A., Terry, Astrid, Prabhakar, Shyam, She, Xinwei, Xie, Gary, Hellsten, Uffe, Man Chan, Yee, Altherr, Michael, Couronne, Olivier, Aerts, Andrea, Bajorek, Eva, Black, Stacey, Blumer, Heather, Branscomb, Elbert, Brown, Nancy C., Bruno, William J., Buckingham, Judith M., Callen, David F., Campbell, Connie S., Campbell, Mary L., Campbell, Evelyn W., Caoile, Chenier, Challacombe, Jean F., Chasteen, Leslie A., Chertkov, Olga, Chi, Han C., Christensen, Mari, Clark, Lynn M., Cohn, Judith D., Denys, Mirian, Detter, John C., Dickson, Mark, Dimitrijevic-Bussod, Mira, Escobar, Julio, Fawcett, Joseph J., Flowers, Dave, Fotopulos, Dea, Glavina, Tijana, Gomez, Maria, Gonzales, Eidelyn, Goodstein, David, Goodwin, Lynne A., Grady, Deborah L., Grigoriev, Igor, Groza, Matthew, Hammon, Nancy, Hawkins, Trevor, Haydu, Lauren, Hildebrand, Carl E., Huang, Wayne, Israni, Sanjay, Jett, Jamie, Jewett, Phillip E., Kadner, Kristen, Kimball, Heather, Kobayashi, Arthur, Krawczyk, Marie-Claude, Leyba, Tina, Longmire, Jonathan L., Lopez, Frederick, Lou, Yunian, Lowry, Steve, Ludeman, Thom, Mark, Graham A., Mcmurray, Kimberly L., Meincke, Linda J., Morgan, Jenna, Moyzis, Robert K., Mundt, Mark O., Munk, A. Christine, Nandkeshwar, Richard D., Pitluck, Sam, Pollard, Martin, Predki, Paul, Parson-Quintana, Beverly, Ramirez, Lucia, Rash, Sam, Retterer, James, Ricke, Darryl O., Robinson, Donna L., Rodriguez, Alex, Salamov, Asaf, Saunders, Elizabeth H., Scott, Duncan, Shough, Timothy, Stallings, Raymond L., Stalvey, Malinda, Sutherland, Robert D., Tapia, Roxanne, Tesmer, Judith G., Thayer, Nina, Thompson, Linda S., Tice, Hope, Torney, David C., Tran-Gyamfi, Mary, Tsai, Ming, Ulanovsky, Levy E., Ustaszewska, Anna
Published 2004

Advancements in the DOE Joint Genome Institute's High Throughput Production Sequencing Program

by Lucas, Susan M., Detter, John C., Glavina, Tijana, Hammon, Nancy, Israni, Sanjay, Pollard, Martin, Copeland, Alex, Barry, Kerrie, Roberts, Simon, Chen, Feng, Slater, Nathaniel, Pitluck, Samuel, Daum, Christopher, Richardson, Paul, Rubin, Eddy
Published 2005

Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.

by Feil, Helene, Feil, William S., Chain, Patrick, Larimer, Frank, DiBartolo, Genevieve, Copeland, Alex, Lykidis, Athanasios, Trong, Stephen, Nolan, Matt, Goltsman, Eugene, Thiel, James, Malfatti, Stephanie, Loper, Joyce E., Lapidus, Alla, Detter, John C., Land, Miriam, Richardson, Paul M., Kyrpides, Nikos C., Ivanova, Natalia, Lindow, Steven E.
Published 2005