Genome-Wide Sex and Gender Differences in Cancer

by Camila M. Lopes-Ramos, John Quackenbush, John Quackenbush, John Quackenbush, Dawn L. DeMeo, Dawn L. DeMeo
Published 2020-11-01

Using methylation data to improve transcription factor binding prediction

by Daniel Morgan, Dawn L. DeMeo, Kimberly Glass
Published 2024-12-01

Constructing gene regulatory networks using epigenetic data

by Abhijeet Rajendra Sonawane, Dawn L. DeMeo, John Quackenbush, Kimberly Glass
Published 2021-12-01

Epigenome-wide association study reveals a molecular signature of response to phylloquinone (vitamin K1) supplementation

by Kenneth Westerman, Jennifer M. Kelly, José M. Ordovás, Sarah L. Booth, Dawn L. DeMeo
Published 2020-08-01

Detecting Differentially Variable MicroRNAs via Model-Based Clustering

by Xuan Li, Yuejiao Fu, Xiaogang Wang, Dawn L. DeMeo, Kelan Tantisira, Scott T. Weiss, Weiliang Qiu
Published 2018-01-01

A Comparative Study of Tests for Homogeneity of Variances with Application to DNA Methylation Data.

by Xuan Li, Weiliang Qiu, Jarrett Morrow, Dawn L DeMeo, Scott T Weiss, Yuejiao Fu, Xiaogang Wang
Published 2015-01-01

Sex-specific associations with DNA methylation in lung tissue demonstrate smoking interactions

by Hyeon-Kyoung Koo, Jarrett Morrow, Priyadarshini Kachroo, Kelan Tantisira, Scott T Weiss, Craig P Hersh, Edwin K Silverman, Dawn L DeMeo
Published 2021-06-01

Correlation-based network integration of lung RNA sequencing and DNA methylation data in chronic obstructive pulmonary disease

by Pasquale Sibilio, Federica Conte, Yichen Huang, Peter J. Castaldi, Craig P. Hersh, Dawn L. DeMeo, Edwin K. Silverman, Paola Paci
Published 2024-05-01

Optimism is associated with respiratory symptoms and functional status in chronic obstructive pulmonary disease

by Hyeon-Kyoung Koo, Karin F. Hoth, Barry J. Make, Elizabeth A. Regan, James D. Crapo, Edwin K. Silverman, Dawn L. DeMeo
Published 2022-01-01

Longitudinal change in blood DNA epigenetic signature after smoking cessation

by Amena Keshawarz, Roby Joehanes, Weihua Guan, Tianxiao Huan, Dawn L. DeMeo, Megan L. Grove, Myriam Fornage, Daniel Levy, George O’Connor
Published 2022-10-01

An effective processing pipeline for harmonizing DNA methylation data from Illumina’s 450K and EPIC platforms for epidemiological studies

by Lauren A. Vanderlinden, Randi K. Johnson, Patrick M. Carry, Fran Dong, Dawn L. DeMeo, Ivana V. Yang, Jill M. Norris, Katerina Kechris
Published 2021-09-01

DNA methylation architecture of the ACE2 gene in nasal cells of children

by Andres Cardenas, Sheryl L. Rifas-Shiman, Joanne E. Sordillo, Dawn L. DeMeo, Andrea A. Baccarelli, Marie-France Hivert, Diane R. Gold, Emily Oken
Published 2021-03-01

Secondary polycythemia in chronic obstructive pulmonary disease: prevalence and risk factors

by Jingzhou Zhang, Dawn L. DeMeo, Edwin K. Silverman, Barry J. Make, R. Chad Wade, J. Michael Wells, Michael H. Cho, Brian D. Hobbs
Published 2021-07-01

Protein interaction networks provide insight into fetal origins of chronic obstructive pulmonary disease

by Annika Röhl, Seung Han Baek, Priyadarshini Kachroo, Jarrett D. Morrow, Kelan Tantisira, Edwin K. Silverman, Scott T. Weiss, Amitabh Sharma, Kimberly Glass, Dawn L. DeMeo
Published 2022-03-01

A consistent pattern of slide effects in Illumina DNA methylation BeadChip array data

by Julian Hecker, Sanghun Lee, Priyadarshini Kachroo, Dmitry Prokopenko, Anna Maaser-Hecker, Sharon M. Lutz, Georg Hahn, Rafael Irizarry, Scott T. Weiss, Dawn L. DeMeo, Christoph Lange
Published 2023-12-01

Metabolomic profiling in a Hedgehog Interacting Protein (Hhip) murine model of chronic obstructive pulmonary disease

by Emily S. Wan, Yan Li, Taotao Lao, Weiliang Qiu, Zhiqiang Jiang, John D. Mancini, Caroline A. Owen, Clary Clish, Dawn L. DeMeo, Edwin K. Silverman, Xiaobo Zhou
Published 2017-05-01

Regulatory network changes between cell lines and their tissues of origin

by Camila M. Lopes-Ramos, Joseph N. Paulson, Cho-Yi Chen, Marieke L. Kuijjer, Maud Fagny, John Platig, Abhijeet R. Sonawane, Dawn L. DeMeo, John Quackenbush, Kimberly Glass
Published 2017-09-01

Epigenomic Assessment of Cardiovascular Disease Risk and Interactions With Traditional Risk Metrics

by Kenneth Westerman, Alba Fernández‐Sanlés, Prasad Patil, Paola Sebastiani, Paul Jacques, John M. Starr, Ian J. Deary, Qing Liu, Simin Liu, Roberto Elosua, Dawn L. DeMeo, José M. Ordovás
Published 2020-04-01

RNA-sequencing across three matched tissues reveals shared and tissue-specific gene expression and pathway signatures of COPD

by Jarrett D. Morrow, Robert P. Chase, Margaret M. Parker, Kimberly Glass, Minseok Seo, Miguel Divo, Caroline A. Owen, Peter Castaldi, Dawn L. DeMeo, Edwin K. Silverman, Craig P. Hersh
Published 2019-04-01

Persistent DNA methylation changes associated with prenatal mercury exposure and cognitive performance during childhood

by Andres Cardenas, Sheryl L. Rifas-Shiman, Golareh Agha, Marie-France Hivert, Augusto A. Litonjua, Dawn L. DeMeo, Xihong Lin, Chitra J. Amarasiriwardena, Emily Oken, Matthew W. Gillman, Andrea A. Baccarelli
Published 2017-03-01