High-throughput whole-genome sequencing of E14 mouse embryonic stem cells

by Danny Incarnato, Francesco Neri
Published 2015-03-01

SHAPE-guided RNA structure homology search and motif discovery

by Edoardo Morandi, Martijn J. van Hemert, Danny Incarnato
Published 2022-03-01

Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae)

by Jackie Lighten, Danny Incarnato, Ben J. Ward, Cock van Oosterhout, Ian Bradbury, Mark Hanson, Paul Bentzen
Published 2016-01-01

Single-Base Resolution Analysis of 5-Formyl and 5-Carboxyl Cytosine Reveals Promoter DNA Methylation Dynamics

by Francesco Neri, Danny Incarnato, Anna Krepelova, Stefania Rapelli, Francesca Anselmi, Caterina Parlato, Claudio Medana, Federica Dal Bello, Salvatore Oliviero
Published 2015-02-01

The transcriptional regulator ZNF398 mediates pluripotency and epithelial character downstream of TGF-beta in human PSCs

by Irene Zorzan, Marco Pellegrini, Mattia Arboit, Danny Incarnato, Mara Maldotti, Mattia Forcato, Guidantonio Malagoli Tagliazucchi, Elena Carbognin, Marco Montagner, Salvatore Oliviero, Graziano Martello
Published 2020-05-01

A chemical probe based on the PreQ1 metabolite enables transcriptome-wide mapping of binding sites

by Sumirtha Balaratnam, Curran Rhodes, Desta Doro Bume, Colleen Connelly, Christopher C. Lai, James A. Kelley, Kamyar Yazdani, Philip J. Homan, Danny Incarnato, Tomoyuki Numata, John S. Schneekloth Jr
Published 2021-10-01

HaTSPiL: A modular pipeline for high-throughput sequencing data analysis.

by Edoardo Morandi, Matteo Cereda, Danny Incarnato, Caterina Parlato, Giulia Basile, Francesca Anselmi, Andrea Lauria, Lisa Marie Simon, Isabelle Laurence Polignano, Francesca Arruga, Silvia Deaglio, Elisa Tirtei, Franca Fagioli, Salvatore Oliviero
Published 2019-01-01

Hmga2 protein loss alters nuclear envelope and 3D chromatin structure

by Giuseppina Divisato, Andrea M. Chiariello, Andrea Esposito, Pietro Zoppoli, Federico Zambelli, Maria Antonietta Elia, Graziano Pesole, Danny Incarnato, Fabiana Passaro, Silvia Piscitelli, Salvatore Oliviero, Mario Nicodemi, Silvia Parisi, Tommaso Russo
Published 2022-08-01

Soluble Neuregulin1 Down-Regulates Myelination Genes in Schwann Cells

by Marwa El Soury, Benedetta E. Fornasari, Benedetta E. Fornasari, Michela Morano, Michela Morano, Elio Grazio, Giulia Ronchi, Giulia Ronchi, Danny Incarnato, Mario Giacobini, Stefano Geuna, Paolo Provero, Paolo Provero, Giovanna Gambarotta
Published 2018-05-01

DNMT3B supports meso-endoderm differentiation from mouse embryonic stem cells

by Andrea Lauria, Guohua Meng, Valentina Proserpio, Stefania Rapelli, Mara Maldotti, Isabelle Laurence Polignano, Francesca Anselmi, Danny Incarnato, Anna Krepelova, Daniela Donna, Chiara Levra Levron, Giacomo Donati, Ivan Molineris, Francesco Neri, Salvatore Oliviero
Published 2023-01-01

Extracellular nicotinate phosphoribosyltransferase binds Toll like receptor 4 and mediates inflammation

by Antonella Managò, Valentina Audrito, Francesca Mazzola, Leonardo Sorci, Federica Gaudino, Katiuscia Gizzi, Nicoletta Vitale, Danny Incarnato, Gabriele Minazzato, Alice Ianniello, Antonio Varriale, Sabato D’Auria, Giulio Mengozzi, Gianfranco Politano, Salvatore Oliviero, Nadia Raffaelli, Silvia Deaglio
Published 2019-09-01

Specific transcriptional programs differentiate ICOS from CD28 costimulatory signaling in human Naïve CD4+ T cells

by Casimiro Luca Gigliotti, Casimiro Luca Gigliotti, Elena Boggio, Elena Boggio, Francesco Favero, Francesco Favero, Francesco Favero, Danny Incarnato, Claudio Santoro, Claudio Santoro, Claudio Santoro, Salvatore Oliviero, Salvatore Oliviero, Josè Maria Rojo, Silvia Zucchelli, Silvia Zucchelli, Silvia Zucchelli, Francesca Persichetti, Francesca Persichetti, Gianluca Baldanzi, Gianluca Baldanzi, Gianluca Baldanzi, Umberto Dianzani, Umberto Dianzani, Umberto Dianzani, Davide Corà, Davide Corà, Davide Corà
Published 2022-09-01

p140Cap inhibits β-Catenin in the breast cancer stem cell compartment instructing a protective anti-tumor immune response

by Vincenzo Salemme, Mauro Vedelago, Alessandro Sarcinella, Federico Moietta, Alessio Piccolantonio, Enrico Moiso, Giorgia Centonze, Marta Manco, Andrea Guala, Alessia Lamolinara, Costanza Angelini, Alessandro Morellato, Dora Natalini, Raffaele Calogero, Danny Incarnato, Salvatore Oliviero, Laura Conti, Manuela Iezzi, Daniela Tosoni, Giovanni Bertalot, Stefano Freddi, Francesco A. Tucci, Francesco De Sanctis, Cristina Frusteri, Stefano Ugel, Vincenzo Bronte, Federica Cavallo, Paolo Provero, Marta Gai, Daniela Taverna, Emilia Turco, Salvatore Pece, Paola Defilippi
Published 2023-05-01

HNRNPM controls circRNA biogenesis and splicing fidelity to sustain cancer cell fitness

by Jessica SY Ho, Federico Di Tullio, Megan Schwarz, Diana Low, Danny Incarnato, Florence Gay, Tommaso Tabaglio, JingXian Zhang, Heike Wollmann, Leilei Chen, Omer An, Tim Hon Man Chan, Alexander Hall Hickman, Simin Zheng, Vladimir Roudko, Sujun Chen, Alcida Karz, Musaddeque Ahmed, Housheng Hansen He, Benjamin D Greenbaum, Salvatore Oliviero, Michela Serresi, Gaetano Gargiulo, Karen M Mann, Eva Hernando, David Mulholland, Ivan Marazzi, Dave Keng Boon Wee, Ernesto Guccione
Published 2021-06-01