Hyper- and hypo- nutrition studies of the hepatic transcriptome and epigenome suggest that PPARα regulates anaerobic glycolysis

by Vernia, Santiago, Kennedy, Norman J., Davis, Roger J., Soltis, Anthony Robert, Motola, Shmulik, Ng, Christopher W., Dalin, Simona, Matthews, Bryan, Fraenkel, Ernest
Published 2017

Regulation of Cellular Heterogeneity and Rates of Symmetric and Asymmetric Divisions in Triple-Negative Breast Cancer

by Granit, Roy Z., Masury, Hadas, Condiotti, Reba, Fixler, Yaakov, Gabai, Yael, Glikman, Tzofia, Winter, Eitan, Nevo, Yuval, Carmon, Einat, Sella, Tamar, Sonnenblick, Amir, Peretz, Tamar, Lehmann, Ulrich, Paz, Keren, Piccioni, Federica, Ben-Porath, Ittai, Dalin, Simona, Regev, Aviv, Root, David
Published 2018

Identifying therapeutic targets by combining transcriptional data with ordinal clinical measurements

by Dunn, Denise E., Avila-Pacheco, Julian, Greengard, Paul, Clish, Clary B., Lo, Donald C., Pirhaji, Leila, Milani, Pamela, Dalin, Simona, Wassie, Brook T., Fenster, Robert, Heiman, Myriam, Fraenkel, Ernest
Published 2017

Network Modeling Identifies Patient-specific Pathways in Glioblastoma

by Pokorny, Jenny L., Sio, Terence T., Iyekegbe, Dennis O., Sarkaria, Jann N., Tuncbag, Nurcan, Milani, Pamela, Johnson, Hannah, Dalin, Simona, Fraenkel, Ernest, White, Forest M.
Published 2017

Differential selective pressure alters rate of drug resistance acquisition in heterogeneous tumor populations

by Sun, Daphne S., Dalin, Simona, Hemann, Michael, Lauffenburger, Douglas A, Zhao, Boyang
Published 2017

Extensive changes in DNA methylation are associated with expression of mutant huntingtin

by Ng, Christopher W., Yildirim, Ferah, Yap, Soon Ming Micha, Matthews, Bryan, Velez, Patricio J., Labadorf, Adam, Fraenkel, Ernest, Dalin, Simona, Housman, David E
Published 2013

Pathway-based network modeling finds hidden genes in shRNA screen for regulators of acute lymphoblastic leukemia

by Wilson, Jennifer Lynn, Dalin, Simona, Hemann, Michael, Fraenkel, Ernest, Lauffenburger, Douglas A, Gosline, Sara Jane Calafell
Published 2017

Elucidating MicroRNA Regulatory Networks Using Transcriptional, Post-transcriptional, and Histone Modification Measurements

by Gurtan, Allan M., JnBaptiste, Courtney K., Bosson, Andrew, Milani, Pamela, Matthews, Bryan J., Yap, Yoon S., Sharp, Phillip A., Fraenkel, Ernest, Gosline, Sara Jane Calafell, Gurtan, Allan M., Sharp, Phillip A., Dalin, Simona, JnBaptiste, Courtney Kenneil, Matthews, Bryan, Yap, Yoon Sing
Published 2016