shinyGISPA: A web application for characterizing phenotype by gene sets using multiple omics data combinations.

by Bhakti Dwivedi, Jeanne Kowalski
Published 2018-01-01

shinySISPA: A web tool for defining sample groups using gene sets from multiple-omics data [version 2; referees: 2 approved]

by Bhakti Dwivedi, Jeanne Kowalski
Published 2018-06-01

NOJAH: NOt Just Another Heatmap for genome-wide cluster analysis.

by Manali Rupji, Bhakti Dwivedi, Jeanne Kowalski
Published 2019-01-01

Survival Genie, a web platform for survival analysis across pediatric and adult cancers

by Bhakti Dwivedi, Hope Mumme, Sarthak Satpathy, Swati S. Bhasin, Manoj Bhasin
Published 2022-02-01

Host Genome Variation is Associated with Neurocognitive Outcome in Survivors of Pediatric Medulloblastoma

by Benjamin I Siegel, Tricia Z King, Manali Rupji, Bhakti Dwivedi, Alexis B Carter, Jeanne Kowalski, Tobey J MacDonald
Published 2019-07-01

Distinct Lineage of Vesiculovirus from Big Brown Bats, United States

by Terry Fei Fan Ng, Cindy Driscoll, Maria Paz Carlos, Algernon Prioleau, Robert Schmieder, Bhakti Dwivedi, Jakk Wong, Yunhee Cha, Steven Head, Mya Breitbart, Eric Delwart
Published 2013-12-01

The level of oncogenic Ras determines the malignant transformation of Lkb1 mutant tissue in vivo

by Briana Rackley, Chang-Soo Seong, Evan Kiely, Rebecca E. Parker, Manali Rupji, Bhakti Dwivedi, John M. Heddleston, William Giang, Neil Anthony, Teng-Leong Chew, Melissa Gilbert-Ross
Published 2021-01-01

ETV2/ER71 regulates the generation of FLK1+ cells from mouse embryonic stem cells through miR-126-MAPK signaling

by Ju Young Kim, Dong Hun Lee, Joo Kyung Kim, Hong Seo Choi, Bhakti Dwivedi, Manali Rupji, Jeanne Kowalski, Stefan J. Green, Heesang Song, Won Jong Park, Ji Young Chang, Tae Min Kim, Changwon Park
Published 2019-11-01

MERTK Inhibition Induces Polyploidy and Promotes Cell Death and Cellular Senescence in Glioblastoma Multiforme.

by Alexandra Sufit, Alisa B Lee-Sherick, Deborah DeRyckere, Manali Rupji, Bhakti Dwivedi, Marileila Varella-Garcia, Angela M Pierce, Jeanne Kowalski, Xiaodong Wang, Stephen V Frye, H Shelton Earp, Amy K Keating, Douglas K Graham
Published 2016-01-01

Obesity-induced galectin-9 is a therapeutic target in B-cell acute lymphoblastic leukemia

by Miyoung Lee, Jamie A. G. Hamilton, Ganesh R. Talekar, Anthony J. Ross, Langston Michael, Manali Rupji, Bhakti Dwivedi, Sunil S. Raikar, Jeremy Boss, Christopher D. Scharer, Douglas K. Graham, Deborah DeRyckere, Christopher C. Porter, Curtis J. Henry
Published 2022-03-01

Signatures of somatic mutations and gene expression from p16INK4A positive head and neck squamous cell carcinomas (HNSCC).

by Nabil F Saba, Ashok R Dinasarapu, Kelly R Magliocca, Bhakti Dwivedi, Sandra Seby, Zhaohui S Qin, Mihir Patel, Christopher C Griffith, Xu Wang, Mark El-Deiry, Conor Ernst Steuer, Jeanne Kowalski, Dong Moon Shin, Michael E Zwick, Zhuo Georgia Chen
Published 2020-01-01

Single cell transcriptomic landscape of diabetic foot ulcers

by Georgios Theocharidis, Beena E. Thomas, Debasree Sarkar, Hope L. Mumme, William J. R. Pilcher, Bhakti Dwivedi, Teresa Sandoval-Schaefer, Ruxandra F. Sîrbulescu, Antonios Kafanas, Ikram Mezghani, Peng Wang, Antonio Lobao, Ioannis S. Vlachos, Biraja Dash, Henry C. Hsia, Valerie Horsley, Swati S. Bhasin, Aristidis Veves, Manoj Bhasin
Published 2022-01-01

Single-cell analysis reveals altered tumor microenvironments of relapse- and remission-associated pediatric acute myeloid leukemia

by Hope Mumme, Beena E. Thomas, Swati S. Bhasin, Upaasana Krishnan, Bhakti Dwivedi, Pruthvi Perumalla, Debasree Sarkar, Gulay B. Ulukaya, Himalee S. Sabnis, Sunita I. Park, Deborah DeRyckere, Sunil S. Raikar, Melinda Pauly, Ryan J. Summers, Sharon M. Castellino, Daniel S. Wechsler, Christopher C. Porter, Douglas K. Graham, Manoj Bhasin
Published 2023-10-01

Targeting TRIP13 in favorable histology Wilms tumor with nuclear export inhibitors synergizes with doxorubicin

by Karuna Mittal, Garrett W. Cooper, Benjamin P. Lee, Yongdong Su, Katie T. Skinner, Jenny Shim, Hunter C. Jonus, Won Jun Kim, Mihir Doshi, Diego Almanza, Bryan D. Kynnap, Amanda L. Christie, Xiaoping Yang, Glenn S. Cowley, Brittaney A. Leeper, Christopher L. Morton, Bhakti Dwivedi, Taylor Lawrence, Manali Rupji, Paula Keskula, Stephanie Meyer, Catherine M. Clinton, Manoj Bhasin, Brian D. Crompton, Yuen-Yi Tseng, Jesse S. Boehm, Keith L. Ligon, David E. Root, Andrew J. Murphy, David M. Weinstock, Prafulla C. Gokhale, Jennifer M. Spangle, Miguel N. Rivera, Elizabeth A. Mullen, Kimberly Stegmaier, Kelly C. Goldsmith, William C. Hahn, Andrew L. Hong
Published 2024-04-01