Increased Frequency of Indels in Hypervariable Regions of SARS-CoV-2 Proteins—A Possible Signature of Adaptive Selection

by Arghavan Alisoltani, Lukasz Jaroszewski, Mallika Iyer, Arash Iranzadeh, Adam Godzik
Published 2022-06-01

Prediction of potential cancer-risk regions based on transcriptome data: towards a comprehensive view.

by Arghavan Alisoltani, Hossein Fallahi, Mahdi Ebrahimi, Mansour Ebrahimi, Esmaeil Ebrahimie
Published 2014-01-01

The interplay of SARS-CoV-2 evolution and constraints imposed by the structure and functionality of its proteins.

by Lukasz Jaroszewski, Mallika Iyer, Arghavan Alisoltani, Mayya Sedova, Adam Godzik
Published 2021-07-01

De novo transcriptome assembly and comparative analysis of differentially expressed genes in Prunus dulcis Mill. in response to freezing stress.

by Sadegh Mousavi, Arghavan Alisoltani, Behrouz Shiran, Hossein Fallahi, Esameil Ebrahimie, Ali Imani, Saadollah Houshmand
Published 2014-01-01

ViralVar: A Web Tool for Multilevel Visualization of SARS-CoV-2 Genomes

by Arghavan Alisoltani, Lukasz Jaroszewski, Adam Godzik, Arash Iranzadeh, Lacy M. Simons, Taylor J. Dean, Ramon Lorenzo-Redondo, Judd F. Hultquist, Egon A. Ozer
Published 2022-12-01

Genomics of Aminoglycoside Resistance in Pseudomonas aeruginosa Bloodstream Infections at a United States Academic Hospital

by Giancarlo Atassi, Rachel Medernach, Marc Scheetz, Sophia Nozick, Nathaniel J. Rhodes, Megan Murphy-Belcaster, Katherine R. Murphy, Arghavan Alisoltani, Egon A. Ozer, Alan R. Hauser
Published 2023-06-01

Genome-wide screens reveal shared and strain-specific genes that facilitate enteric colonization by Klebsiella pneumoniae

by Bettina H. Cheung, Arghavan Alisoltani, Travis J. Kochan, Marine Lebrun-Corbin, Sophia H. Nozick, Christopher M. R. Axline, Kelly E. R. Bachta, Egon A. Ozer, Alan R. Hauser
Published 2023-12-01

Resurgence of SARS-CoV-2 Delta after Omicron variant superinfection in an immunocompromised pediatric patient

by Arghavan Alisoltani, Lacy M. Simons, Maria Francesca Reyes Agnes, Taylor A. Heald-Sargent, William J. Muller, Larry K. Kociolek, Judd F. Hultquist, Ramon Lorenzo-Redondo, Egon A. Ozer
Published 2023-10-01

Microbial function and genital inflammation in young South African women at high risk of HIV infection

by Arghavan Alisoltani, Monalisa T. Manhanzva, Matthys Potgieter, Christina Balle, Liam Bell, Elizabeth Ross, Arash Iranzadeh, Michelle du Plessis, Nina Radzey, Zac McDonald, Bridget Calder, Imane Allali, Nicola Mulder, Smritee Dabee, Shaun Barnabas, Hoyam Gamieldien, Adam Godzik, Jonathan M. Blackburn, David L. Tabb, Linda-Gail Bekker, Heather B. Jaspan, Jo-Ann S. Passmore, Lindi Masson
Published 2020-11-01

Correction to: Microbial function and genital inflammation in young South African women at high risk of HIV infection

by Arghavan Alisoltani, Monalisa T. Manhanzva, Matthys Potgieter, Christina Balle, Liam Bell, Elizabeth Ross, Arash Iranzadeh, Michelle du Plessis, Nina Radzey, Zac McDonald, Bridget Calder, Imane Allali, Nicola Mulder, Smritee Dabee, Shaun Barnabas, Hoyam Gamieldien, Adam Godzik, Jonathan M. Blackburn, David L. Tabb, Linda-Gail Bekker, Heather B. Jaspan, Jo-Ann S. Passmore, Lindi Masson
Published 2022-03-01

Lactic acid from vaginal microbiota enhances cervicovaginal epithelial barrier integrity by promoting tight junction protein expression

by David Jose Delgado-Diaz, Brianna Jesaveluk, Joshua A. Hayward, David Tyssen, Arghavan Alisoltani, Matthys Potgieter, Liam Bell, Elizabeth Ross, Arash Iranzadeh, Imane Allali, Smritee Dabee, Shaun Barnabas, Hoyam Gamieldien, Jonathan M. Blackburn, Nicola Mulder, Steven B. Smith, Vonetta L. Edwards, Adam D. Burgener, Linda-Gail Bekker, Jacques Ravel, Jo-Ann S. Passmore, Lindi Masson, Anna C. Hearps, Gilda Tachedjian
Published 2022-08-01

US National Institutes of Health Prioritization of SARS-CoV-2 Variants

by Sam Turner, Arghavan Alisoltani, Debbie Bratt, Liel Cohen-Lavi, Bethany L. Dearlove, Christian Drosten, Will M. Fischer, Ron A.M. Fouchier, Ana Silvia Gonzalez-Reiche, Lukasz Jaroszewski, Zain Khalil, Eric LeGresley, Marc Johnson, Terry C. Jones, Barbara Mühlemann, David O’Connor, Mayya Sedova, Maulik Shukla, James Theiler, Zachary S. Wallace, Hyejin Yoon, Yun Zhang, Harm van Bakel, Marciela M. Degrace, Elodie Ghedin, Adam Godzik, Tomer Hertz, Bette Korber, Jacob Lemieux, Anna M. Niewiadomska, Diane J. Post, Morgane Rolland, Richard Scheuermann, Derek J. Smith
Published 2023-05-01