Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?

by Adam B. Olshen, Mark R. Segal
Published 2023-02-01

Pan-cancer identification of clinically relevant genomic subtypes using outcome-weighted integrative clustering

by Arshi Arora, Adam B. Olshen, Venkatraman E. Seshan, Ronglai Shen
Published 2020-12-01

Integrative subtype discovery in glioblastoma using iCluster.

by Ronglai Shen, Qianxing Mo, Nikolaus Schultz, Venkatraman E Seshan, Adam B Olshen, Jason Huse, Marc Ladanyi, Chris Sander
Published 2012-01-01

Development and Validation of a Gene-Based Model for Outcome Prediction in Germ Cell Tumors Using a Combined Genomic and Expression Profiling Approach.

by James E Korkola, Sandy Heck, Adam B Olshen, Darren R Feldman, Victor E Reuter, Jane Houldsworth, George J Bosl, R S K Chaganti
Published 2015-01-01

Therapeutic implications of transcriptomics in head and neck cancer patient-derived xenografts

by Rex H. Lee, Ritu Roy, Hua Li, Aaron Hechmer, Tian Ran Zhu, Adila Izgutdina, Adam B. Olshen, Daniel E. Johnson, Jennifer R. Grandis
Published 2023-01-01

Therapeutic implications of transcriptomics in head and neck cancer patient-derived xenografts.

by Rex H Lee, Ritu Roy, Hua Li, Aaron Hechmer, Tian Ran Zhu, Adila Izgutdina, Adam B Olshen, Daniel E Johnson, Jennifer R Grandis
Published 2023-01-01

COVIDNearTerm: A simple method to forecast COVID-19 hospitalizations

by Adam B. Olshen, Ariadna Garcia, Kristopher I. Kapphahn, Yingjie Weng, Jason Vargo, John A. Pugliese, David Crow, Paul D. Wesson, George W. Rutherford, Mithat Gonen, Manisha Desai
Published 2022-01-01

Genome-wide DNA methylation is predictive of outcome in juvenile myelomonocytic leukemia

by Elliot Stieglitz, Tali Mazor, Adam B. Olshen, Huimin Geng, Laura C. Gelston, Jon Akutagawa, Daniel B. Lipka, Christoph Plass, Christian Flotho, Farid F. Chehab, Benjamin S. Braun, Joseph F. Costello, Mignon L. Loh
Published 2017-12-01

Genetic analysis of the early natural history of epithelial ovarian carcinoma.

by Bhavana Pothuri, Mario M Leitao, Douglas A Levine, Agnès Viale, Adam B Olshen, Crispinita Arroyo, Faina Bogomolniy, Narciso Olvera, Oscar Lin, Robert A Soslow, Mark E Robson, Kenneth Offit, Richard R Barakat, Jeff Boyd
Published 2010-04-01

Perturbations in common and distinct inflammatory pathways associated with morning and evening fatigue in outpatients receiving chemotherapy

by Kord M. Kober, Carolyn Harris, Yvette P. Conley, Anand Dhruva, Vasuda Dokiparthi, Marilyn J. Hammer, Jon D. Levine, Kate Oppegaard, Steven Paul, Joosun Shin, Anatol Sucher, Fay Wright, Brian Yuen, Adam B. Olshen, Christine Miaskowski
Published 2023-03-01

Changes in abundance of oral microbiota associated with oral cancer.

by Brian L Schmidt, Justin Kuczynski, Aditi Bhattacharya, Bing Huey, Patricia M Corby, Erica L S Queiroz, Kira Nightingale, A Ross Kerr, Mark D DeLacure, Ratna Veeramachaneni, Adam B Olshen, Donna G Albertson, Muy-Teck Teh
Published 2014-01-01

Venetoclax and dinaciclib elicit synergistic preclinical efficacy against hypodiploid acute lymphoblastic leukemia

by Holly Pariury, Joshua Fandel, Stefanie Bachl, Kenny K. Ang, Sarine Markossian, Chris G. Wilson, Benjamin S. Braun, Bogdan Popescu, Margo Wohlfeil, Kyle Beckman, Simayijiang Xirenayi, Ritu P. Roy, Adam B. Olshen, Catherine Smith, Michelle R. Arkin, Mignon L. Loh, Ernesto Diaz-Flores
Published 2023-01-01

Caveolin-1 and Sox-2 are predictive biomarkers of cetuximab response in head and neck cancer

by Mehdi Bouhaddou, Rex H. Lee, Hua Li, Neil E. Bhola, Rachel A. O’Keefe, Mohammad Naser, Tian Ran Zhu, Kelechi Nwachuku, Umamaheswar Duvvuri, Adam B. Olshen, Ritu Roy, Aaron Hechmer, Jennifer Bolen, Stephen B. Keysar, Antonio Jimeno, Gordon B. Mills, Scott Vandenberg, Danielle L. Swaney, Daniel E. Johnson, Nevan J. Krogan, Jennifer R. Grandis
Published 2021-10-01